64 5916
                                                                                        1
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ATGTCCAACACTGTGAATTTTAACAGGTACGGCGAT---CAGCCAGGGGACTTATATGACGCACAGACTGATTCCTGT---CAGACCTCA
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ATGGCCAATGCAACAGGATATCCCGCATATCCCGATTCTAGACTGGAATCAACATATACAGCAAATGCAGAGAGATGT---TTGGAAAGT
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------------------ATGCAGCAAAGCTGT---GCACCAGGT
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------ATGCAGCAGAGCTGT---GCACCAGGT
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------ATGATGGGAGAAGAATTACAACACACGACT
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------------------------ATGCTTCGG------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------------------------ATGATGGCACATTAT---GAAGTGTCG
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------------------------ATGCTAGCC------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------ATGGGCATC------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------ATGCAGCTGGGAGAGCCTCTG---CTGGCGGCG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------ATGCAGTTAGGGGAGCAGCTC---TTGGTGAGC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------ATGCAGCTG---GAGCATTGT---CTTTCTCCC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------ATGCAGCTG---GAGCACTGC---CTTTCTCCT
Acanthaster-planci_oki58-6_NONE                                                         ---------------------------------------------------------ATGGAACTGTCGGAGAAGGCG------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------------ATGCTAGAT------------------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------ATGAGTGCC------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------ATGCCTGCAATGAGCGCC------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------ATGACAACA------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------ATGACAGCCTACCGTTGC---GCGCCGTATATCGGGACACCTAGCATGAGTACT------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------ATGAGTTCGGCG------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------ATGAGTTCTGCG------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------------ATGGCAGAC------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------ATGGCCATGAGTGAG------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------ATGGCT------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------ATGAATCGA------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------ATGATCACCATGAACGAG------------CTGGTG
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------ATGCTTTCCATGCAAGAG------------CTAATG
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ---------------------------------------------------------------ATGAATACT------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------------ATGGATAAC------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------------------------------ATGTCACAA------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------ATGGAAAGAAATTCGGGAGTGTGGAGG------------ACTGAG
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------ATGGAGGACAGCAGTTGTTTGAGAAAA------------ACAGGA
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------------------------------ATGTCAAAAAGATGT---GCAAGTGAT
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------------ATGGAATCTACGTGT---AATTCTGAG
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------------------ATGGAGGAC------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------------------ATGGCGGAC------------ACCGAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------------------ATGGCCGAC------------GCAGAC
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------------ATGTATGAG---------------GAC
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------ATGATGTACGAA------------TCCGAG
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------ATGATGTACGAA------------TCAGAG
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------------ATGTATGAA------------AGTGAC
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------ATGATGTACGAA------------AGCGAA
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------------------------------------------ATG
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------------ATGTGTTTGACCGAT------------AGCGAA
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------ATGAGATAC------------GACGTCCAGGAGCTGCTATTTCATCAGTCT------------GCTGAG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------ATGATTTTCCAGGGACCA------------AATCCG

                                                                                        91
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        GAGTCACAG---------------------------------TTCCCG---------GTGCTGTCCTCCT...AGCCCTACTTCTGTCAG
Pinctada-fucata_pfu5110-102705t1_NONE                                                   GAGGGACAC---------------------------------TAC------------ACTCTCCCCAGTC...AACCTTATTACTGTGAA
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 GAACCGGGA---------------------------------TTT------------------------------------------CAT
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   GAAGCTGGA---------------------------------TTC------------------------------------------CAA
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GATCAGGGTAATGAACACGTT---------------------------------GCTGCAACAAATCCA.CT.AGTTT------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------GGTGAGTTTGGCTCCAAATTGCCG------CCCGTGGGGCAAGGGGA...GTATACAGTGTCACAC
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            CAACATCAC---------------------------------------------CAATTTGCAGCATCT...G..---------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------GTGGAG
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              GCGGGGGGG------------------------------------------------GCCCTGCCGGGAGCCCC.TTTTACCCGCTGGAG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  TCAGTGAAC---------------------------------------------------CTGCCTGGCGC.CA.TTCTACCCGCTGGAG
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              TCTATC------------------------------------------------------ATGCTCTCC.A..AATTTCTCAATGTGAGC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             TCTATC------------------------------------------------------ATGCTCTCC.A..AATTTCTCAATGTGAGC
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------AGCGCATTTTCCATCGAGTCTTTGATGTCAGGTTCCTCG---------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------------TCTGCG.CT.AGTGC------------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------GACACA...C.A---------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------GACGCTC..C.T---------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------GTTGAC....AG---------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------------ATAGCC....AA---------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------------------....AG---------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------....AG---------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------------GAGACG....AG---------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------GAAACG....AG---------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------------CTGGGCTGC.AA---------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------------CTGGGC.CTC.G---------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------------------...G..---------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------------------ATGAGC---------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------------------------ACAACCGGC.AA---------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             GATCTGCGC------------------------------------------------------------...------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             GATATGCGG------------------------------------------------------------...------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------CAGTATCCA------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               GACATT------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            GATATG------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   AGAGATGATAAA------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     GAGAATTCCAGAATAGATGTT---------------------TTACCC---------GGCATGGACGTGGGTCCG---------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------CACGAAAGCGGCTC.---------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    GAAGGCTTC---------------------------------------------------------GGGC.CCCG---------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             GAGGGCTTT---------------------------------------------------------GGCC..GCG---------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              GATATT------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    GACGTG------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   GACGTT------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GACATC------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        GATATC------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                GATCAAGGC---------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------------------------...GCA---------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------ATGATTCAAGAATCC....AG---------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GACCAAACTAGAAGTTCTTCTCCGTTGGAACATCATTTTAATCTTCCAACACCCATGATTCAAGACTCA....AG---------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------------------------...GC.---------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GAT------------------------------------------CCATTCGCCAGGTTCGCCAATGGG...GCA---------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    GAT---------------------------------------TTACCC---------------------...GCT---------------

                                                                                        181
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        GATTACCTGTCTCAGGACCCCGGCCAG---------------------GATGTTCAGCA...CCTT..TCAGTACAGCCATCAC------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   GGGTATGCCTATCCAGAGGGCCAACAA---------------------CAG---------------.GTTCATACACACATCTG------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ACCTACGGAACA---GACACGAGTCTG---------------------GACGGGGGAGGG....CT..AGGGCCGACCAGGATG------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   GCCTACGGAACA---GACACGAGTGTA---------------------GACGGGGGAGGG...ACTT.AGCGCCGACGAGAATG------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------CAA---------------------AAGACGACGGAA..A.AGGAAAGCGATAAAGTTTATGAAGAT
Acanthaster-planci_oki20-22_NONE                                                        CATGGATGGACCAAAGATACTGAACAAGGGAACACCAATCATTGTCTTGCACCTACGAGG..CAA.GGTGGG------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------AATCAG..ACATG.ATCCAACAGACAAAACAGAATG
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------..G..TTG.GGA------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              GGCGGCGGGCGC---------GGCAGC---------------------GGGACCGGAG..GGA..AGG.GGCGGAGCC------GCGTCC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------AGTGCGCGAGGC....G.GGCGGGAGC------GCTGGC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------AGCAGT.A...ACA.G.AGGCGGATCCGAGCTTGCCTTG
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------AGCAGC.A...ACATT.AGGCGGATCCGAGCTTGTCTTG
Acanthaster-planci_oki58-6_NONE                                                         ---CAAGCGGTCAGAGATGATGACGACCGCTGCCGGTCAGCTGATATCAGCAGCTGT..A..C---------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------GATTTTCAA..GTTTT..GTAAAATCTGAAATAGGCACG
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------G.T..C---------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------G....G---------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------C.A..G---------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------CAG...---------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------CAG------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------CAG------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------CAG------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------CAG...---------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------AAG..CA.T------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------AAG..CA..------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------.....G---------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------TCCCCTGGCACC---------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------..G..GCA.GAAGTA------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------------------AGTCAAGTT...A..TG.GTATATGGTCAGAGTAAT---
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------------------GATTCGGAG..C.TT------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------AGC..G..CAAT------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------GAGCAG..C---------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------AGCA.G..G---------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------CACA.G...---------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------TTCAAT..A---------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------CCCGGA..G---------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------CCAGGA..C---------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------TACG.A..C---------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------TATCAT..A---------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------TATAAT..A---------------------------

                                                                                        271
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------TCCCTG..C.CTCACAACC..GA.AAA..T.T.GAC.A.CCA------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------ACCCCG..A.ATT.AA.TCCCGAGAAAAGT..TGAG.AAACG------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------..CGCA.GC.AC---GA.GACAGCCC.G.TAAC.C.------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------..CGCA....ACGTAGA.GACACCGC.GTC.GAACG------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GAGAATCTTGATAGAGATGACGGGAGCAATGGATCTGAAGATACCAACTGCGAAAA.TC..CAGT.GAA..A.TTGATACCA.T------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------GGGATCA.C.T.CAAA.CCCATCAAGT...GC.G..A..C.G------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            AAT------------------------------GTACTTCACGTCAGC.GAGAA.AACCC.CAGATGCCGG..TTTCCA.AA..------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------TCG..TGAAAACAAC.GCGA.GGTGGC.TTACTA.TACT------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              CGCGGG------------CCGCCGCGCCCGGGCTCCCCGGCTCATCTC..CCTG.ACAAGGC.GC.AA.A...T.---------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  CACCTC------------CCCAGCGCGGCCCCCTCTCCTCAGAAGTTG..CTTA.ACAA.GC.TC.AA.A...TTTCC.GCAGTCTCTCC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              CATGAT------------CATCCCATTATCTCGACCACTGACAACCTG.....AAGTTC.CCTTTGAAAA.AATTACCAG.---------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             CACGAT------------CATCCCATTATCTCGACCACTGACAACCTG.....AAGTTC.CCTTTGAAAA.AATTACCAG.---------
Acanthaster-planci_oki58-6_NONE                                                         ------------GTGCCCAAGCCAGAGCCTCCGCGGACGGACAGCATC..TGAT.GCACCGCTGC.TCCAGA.T.ACGC.CTC.------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------ATGACCACATCG------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            AAC------------------------------AGAGGGACACAGGAAA.A..T.AAATG...TCTACC....TAAAT..CAG.------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------------ACC...AAC....CG------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------------TCC...AAC..TTCG------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------------TC....AAC...A..------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------------------ACT.T.AAC..CA.T------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------.CCCCGGAC....T.TCG...AG.------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------.CACCGGAC....T.TCG..TAG.------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------.C.....CG.C.CCGGAC....T.TCG...AG.------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------.C.....CGTC.CCGGAC....T.TCG..TAG.------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------------------G.C.G.ACC..CTC.------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------------------G.TGG.ACT..TTCT------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------...GA......C...GCG.C.GC.............------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------GAGAGCGCGGGAAAGAGCCTGCAGTACCGAGTGGAC------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------------A.C.TTTCGA.C..T------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------------------------CAGCA.CAC.TAGCA.ACG..AT.TATCGCC.G------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------CAGCA.CAGCT.GC..ACG..AT.TACCGCC.G------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------TCGA.CATTG.C....ACG..ATAACGC.TA..------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------------TTAAACTT...CTCAAACAGC---AATA..AGA------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------TTA.AC.T...T.CGAACAGC---AACC..ACT------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------....AA.CC.GT.TTTCGA.T.C.------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------AAGACCCCTCT.T.ATCT...GCTACAGCT.TTTCTA.T.C.------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------AAGTCAC..CTGT.TA.CCG.GCGAATGCA.TTTCCA.C..G------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------GTT.ACTCGG..GC.AA.G..CTG.AG.CT..G------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------CTG.A.CCTG.CGCAAAAG.CCTG.CCTGC..T------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------.T.AGCCA..G.GC.AG.GCC.TT.CCC...G.------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------------TTGA.TCAG.GAGCG.GAGCT.T.TCGA.CA..------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------TTGA.ACAG.GAGC..G.GCC.T.TCCA.CA..------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------CTGAGCCACCGTGCG.GAGC..T.A.TA.CA..------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------CTGAGCCAT.GAGCT.GCGC..T.A.CA.CA.T------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------CTTCTACCG.C.CAA.GATCA------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------TTTGCA------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------A..AGT------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------ATTTCTCCTCTTCA..CGGT..TGTC.GCT...AACCACTC.------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------ATCTCCCCCCT.CA..C.GTT.TGTC.GCT..TAATCATAG.------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------ATA------.TGC..CATCGTCT.AGCG.C.T.TCC..CA..------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------TTTCTGC..CTAA..CA.CGACC.ACTG.C.T.A.C..TTC.------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------TTT------CTTCTTCAC.GACC.GC.G.T..T---------------

                                                                                        361
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------G..TCCA.C.A.------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------G.AGATT..TCG------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------G..ACCT.CCAG------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------G..TCCT.CCAG------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------A.AT.AA.TTCAAACGCTGATCATAACGTCGGGGAT
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------TCAGGAAAATACGGT..AA....TGATGACGGCACCAGCAGGGAAACAGAG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------A..T..T..CC.GCGTATAGAAACGACGCTAGCAAC
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------A..T.....TCTTCTTATCGAGATGGCGGCGGAGGG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------G..A......CGGGCACCGAG---------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------GCGGCGGCTCCG---GC.A.....G..GAGCCCGACGCGGGGGAG------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  TGCGAGGCGGTGAGCGGGGAGCCCGCAGCCGCC---AGCGCAGGGGCCCCCGCGGC.A....T..TGACACCGACGCCGGGGAC------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------GGGA..AC..ATCAGTCAGATACAGACAAT------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------GGGA..AC..ATCAGTCAGATACAGACAAT------
Acanthaster-planci_oki58-6_NONE                                                         ------------------GATCCCGTGATTGACTTCAGCGCTCAACGTGCAGCCTCT..C...C.GAAAATCTCGATACGAGGCAGT---
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------...A.C...TC.------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------..T..C.....T------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------............------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------..T..T..C.A.------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------.....CT.....------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------...T....C.A.------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------.....C..C...------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------.....C......------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------.....C..C...------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------.....C......------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------AGG.....C...------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------..T.....C.AT------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------............------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------CACCTGCTGAGC------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------A..TC.------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------AGTA..ACC...------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------------------A..AC.TCA------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------GCTA.TT..GCTAGAAAA------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------..GA.CA..CAG------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------..GA.CA..CAG------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------------------A..A.CGC.------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------TC.T.ATC.TC.ATTTCAAAAGGCGACGAT------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------GC.T.AT..GTT------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ---------------------------------------------------------A..GC..CA------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------A.TA..TCA.CT------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------G.AA..G.TGCA------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------A..A.T..TGATGAAGTAGAAGACGAGGAA------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------GCTA.TA..G.AGGGGAGCGGAACCAGGGT------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------GCA..CA..GCTGGTAGTAAGACCAGGACT------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------GC.AA..A.GAT------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------TCGAAA.CCGAG------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------...GGAT...TG------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------A..A..------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------A..A..------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------AGTA.AG..TC.------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------AGTA.CG.ATCA------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------GGTA.AT.A..T------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------GGGA..T..CC.------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------GGGA..A..CCT------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------TC......C.CA------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------TCG...T...CGGCGGGTAGCAACAATAACAACAGC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        451
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            CCAAATAAC---------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        GGACAGGATACCCGGAAC------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            GATAACAGTAACCGG---------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        GCAAACAGCCACGCTTAT------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------------------------------------------CCG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GGCAACACCAACAGCGGAAACAACAACTCCAATTCCAACAACAACACCAATTCAAACACCAATAACACCAACAATCTCGTGGCCGTTTCA
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        541
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            CCCCAGTTCTTCCCGGGAATGTTCGGCAGGAATGCCTGTCTG------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CCAACG------------------GGTGGTGGTGCGCAGTTATCGCCGCAAAGCAACCACAGCAGCAGCAACACCACCACCACCAGCAAC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------GGAGCCCTTCTA------------------------------------------------

                                                                                        631
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------CAC---------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ACCAACAACTCCAGTTCCAATAACAACAATAATAACAGTACCCATAATAATAACAACAACCACACGAATAACAACAACAATAATAATAAT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        721
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------CCGGTC------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------CCA---------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------CCGAGCGGCCTC------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------CCGCCCGGTCTC------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------GACTACCCTTGCAACAAGTTTGAGTTATGTGAGATCAAGTCCAATTTA
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------CAGCATCCTCTGACAGTC------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------ACAGACTCCAGTACA------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------GGAGATCCCGACAACGGTCCCAGT------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------CCGATGCCGGGGAGCGACGAG---------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------CCGCCCTTCGCCGCCCCGAAG------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------GCATTTGCCAGCGCTGCGGCA---------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------TTTCCCGACTCCAAG------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------TTTCCTGACTCCAAG------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------GAGGAGCCGGAGAACGCAGAGGCCACCATC------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------CGCATACCA---------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------CGGATTCCA---------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------CAAGATCCGTGCAACGGT------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            GACGTGAGAGGC---------TCAACCTTCGAA---------------CCA---------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               GTTTTAGCTCAAAGACAAGAGCATACGTTTACA---------------GAA---ATATCC------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            CCGGCAGCAGTT---------TGCAACTTTAGA---------------CCAGATTTAAAT------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------GTGGAACAGTACCCTAGTACCTCC------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------ACGGAGGCGATCAGCGAGCCGCGG------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------CCC---CAGCTG------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------AGC---GCGCTC------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------CCCACCCCACAG------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------CTGACC------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------CTGACC------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------CCA---CCAAGG------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------CCT---CCGCGA------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------CCT---ACCGAG------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------------CTT------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------------------AAC------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------CCCGGC---GCC------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 AACACAAGTCAAAAGCAAGGACACCACTTGAGCACCACCGAGGAACCGCCATCGCCCGCT------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------CAGCAGCATTACCTCCAGGGGATG---GGCGTTCCCAACCCCGCC------------------------------

                                                                                        811
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------------------------------------------------------------------TCC
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------GGCCTGCCATAC---------------------------GGCATG
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------AGCATGCCGTAC---------------------------GGTATG
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GAGAATTCTCAAACAGGGAGGCAGTCTGATTTGTTTCAGAGGAATGGACATGCACAT---------------GAAAATGCAGAACAATTT
Acanthaster-planci_oki20-22_NONE                                                        ---AACACCGAGTGTTGCACGCCGAGGGACGCCGAAGAGCATATCACTGCGCCCCAC------------------CAGCAAGCTAACCTT
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------GCTACAACTACGATACGTAACGACGATGATGAAGAAACTGAAATC
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------GCCACACCGAGCGGCAACAGCACAGACGACGAAGCATCGACTGTG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------GGCCGGGCGCCTGGC---------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------GTGGCCAAGCCGGGG---------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------GACACACCAGGG---------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------GACTCACCAGGG---------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------GCGTCATCCTCAGGGGCTTTCCCGGAG---------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------GCAGAGCCTTAC---------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------AATGCCCCACAC---------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------ACATCGGGTTTG---------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------GATGTGGAAGTTGATGTT
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------CTAGAACGCTCC------------------GAATCTGCATTTTCC
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------CAGTCGGCGCAG------------------AACCACTCAGGTTAC
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------GGGACCACCAGC---------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------GGGGCCCCCAGC---------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------GCTTTCAGTTTT---------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------GGGTCCCCGCAT---------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------GGGTCCCCGCAC---------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------GGATTCGCGTAC---------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------GGCTTTTCCTAC---------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------GGTACAGGCTACGCTGACCTGACTGACTGGACTTGTACGATGATC
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------GGACGTCCTGAT---------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------TCGTATCCAGGC---------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------TCTCGATCTGGA---------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------TCTCGTCCTGGG---------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------GGACTCCCAGGA---------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------------GGCACACCACCGCCCACA---------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------------------GGACTTCCAGGA---------------------------------

                                                                                        901
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        TCC---------------------------------------------TCGGAGTACACCCCTCCCCGGGACAGT---------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   AAT---------------------------------------------GCAGGGTATCAATCGCCGGGTAGTGGG---------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ACA---------------------------------------------GGAGGCTACACCCCGCCGGATAGCAAC---------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   TCC---------------------------------------------GGAGGGTACACCCCACCGGATAGCAAC---------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AGTTTACATGATTTTAACGCACATCATGACTCGGATGGGAATTCGCAGCGGTGTTATCCGTTCCCGTCCCTGCAA---------------
Acanthaster-planci_oki20-22_NONE                                                        TCA---------------------------CGTTACGCATTTGACAACCACTTCCATCCCAGCCCGGAGTTAGCG---------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            AGCATC------------------ACTTCGAGACATTCCCAG------TCTTCGAGATCGCCGCCAGTAGCATCT---------------
Ptychodera-flava_PF12118-t1_NONE                                                        TCG---------------------GCATCCGGGGATTCCCAACCGATCAACTACCGATCGCCTCCTGACTCA------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------GCCGACCCGCAGCACCGCTACTTCTACCCGGAG---CCGGGCGCGCAGGACGCG
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------CCGGACGGCCGCAAGACTACCCCCTGC------GGGGAGGAAGAGCTG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------CCCCCGGACGGCCGCAAGGGCTCCCCCTGC------GGGGAGGAGGAGCTG
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------GACGTCCAGAGAAATAAACTCTCTCCCGTCTTGGACGGGGTCTCCGAGCTT
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------GACGTCCAGAGAAGTAAACTCTCTCCTGTCTTGGACGGGGTCTCTGAGCTT
Acanthaster-planci_oki58-6_NONE                                                         ---------------------CGTCTAGAAAATCCAGGCATTGTCGGACGGCAATCGGTCCGTCCGAAAATCAAG---------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------CCAGTTGAAAAG---------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------GATCCGTTTCCGCCGATG------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------GATCCCTTTCCATCGATG------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------TTTCCAACCTACAATTTTTGCAATGATACA
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------TACACAGAGCAAACTTCGCCAGAGACAGAA---------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------GCAAGTAGTCCATACATGTCT---------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------CGTGAAATGCCATACGCAAGG---------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   GAA------------------------------GACGTGGATGACGTGGATTTATCATCAATTCCATCGAAAAGT---------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ACT---------------------------------------------GAAATCCCTCCTGTACCAAAAATACCA---------------
Acanthaster-planci_oki169-35_NONE                                                       TTG---------------------------------------------CAGCTGGTACCAACTCCCATTTCACCC---------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------GGATTTCCTATGCACCCT---------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------GCCGCGTTCCCGTTC---CCG---------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------------GCGTTCCCGTTC---CCG---------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------CACGGTCTGCCGCCTATGCAG---------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------CACGGTTTA---CAGATGCAA---------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                AGC---------------------------------------------CCTTTCGGAGCTTTTCCATTTCCCGCT---------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------CTTTTGTTACCATTTATG------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------AGCGATCTTCCATTCTTC------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------AGCGACCTCCCGTTTTTC------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------------------------ATGTTCCCGAAACTC------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------TTCCATCTACCGAAATTC------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------------------ATTGTTGGTCTACCGCCAATACCACCGCCCAACAACAAC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------TCTCTGCTACCCAAACTACAA---------------

                                                                                        991
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------------------------------------------------CACGGAGCCAGC---------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------------------GGAACACCCAGC---------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------------------------AGCTCCCGCTCT---------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------AGCTCCCGCTCG---------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------AACCAACAACAGCAACAGTCGAAT------
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------------------------------AACTTCTCAACGCCA------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------GACGAGCGTCGCGGGGGCGGCAGCCTGGGGTCT---------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              CCTCCGGCCGCCGCC------------------------------------GCGCGGTACTCCATGGACAGCCTGAGCCCCGAG------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  CCCTCCGCCGCTGCAGCCGCCGCCGCCGCCGCCGCCGCGGCTGCGGCCACTGCGCGCTACTCCATGGACAGCCTGAGCTCCGAG------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------CGTCACAGTTTCGATGGATCTGCCGCAGAT------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------CGTCACAGTTTCGATGGCTCTGCTGCAGAT------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------ACA---------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------AATCAGGCCTACACAAGCGCGGAAAATGCTCAGCAAGAT------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------------------CAGTGTGCCCCG---------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------------------CAGTGCGTCAGC---------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------AGCAGTAGCAGCAGCAGCAACAACTCAGCTTCAGCCGCCGCC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1081
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------GATCAGACTTATCATACG------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------GCGCATCGATCC------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------GGAGCAGGAGTTGGTGGTCCTGGAGCC------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CATCCGTCGCACCACCCAACCGCCGCACATCACTCACCCAGTACGGGTGCCGCCGCACCGCCCGCCGGCGCCACAGGCTTGCCGCCACCC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1171
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------------------------------------TTACCGCAATACCTGTTGAAT
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------CCAGTGCCAAATTACCATCCTTAC------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ACT---------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------CCC---------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------CGCTACTACCTGCAGTCCCCCGGGCCGCCGGTCGCCGAGCTGGGGGGGCCCTGCGCTCTCTTCCCT---------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------CGGTACTACCTCCAGTCCCCCGGTCCTCAGGGGTCGGAGCTGGCTGCGCCCTGCTCACTCTTCCCG---------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------CGCTATCTGCTCTCTCAGTCCAGCCAGCCCCAGTCTGCTGCCTCCGCGCCCAGTGCCATGTTCCCC---------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------CGCTACCTCCTCTCTCAGTCCAGCCAGCCACAGTCTGCGGCCACTGCTCCCAGTGCCATGTTCCCG---------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------AGACCAACCGGCGTGCTCCCAGAC------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------AGAAAGCAAATAATCACTAAG---------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------TCCAATGACCGTTTGCATGGG---------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------AATTTACAACGGCCAAGAGGTGCACCGCTG------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------CCT---------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------GAAGCACGAGTG------------------------TCGCCCTCTATAATTGTTCCAAAG---GATTTGAAA
Acanthaster-planci_oki169-35_NONE                                                       ------------------TATAGCCGTGTCGCTCAGCAAGGGTCTGCACAAAGTGCTCCATCAAGCCCTACTCCGCAC---GGCACTGTG
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------AGCTTCCCGATGACTCAGGCCGCGCCCGCCCCGCCACCGGACCCG---------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------GGCTTCCCTATGGCACAGGCCGCGCCCGCCCCGCCGCCAGACCCG---------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------------------------------------GGG
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------GGTGGTCCACCACCAAATTTGTTTTTTTCA---ATGCTTCAA
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------------------CCGCCTTCTTATTTCCCAAAT---TTGTCAATG
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------------CCGCCTTCATATCTTCCTAGT---TTATCAATG
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------GGAGATCCGCGTTGCCACTACGCTCCG------GACCTTCTG
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------GGTGAACACCCAGCGGCCTACTCCCCGCAT---GACCTGCTG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ACACCGCCGCACCACCTGCAACAACAACAGCAGCAACAACAGCACCCGGCCCCACCACCACCACCGTACTTTCCAGCT---GCGGCACTG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------------------CAATCAGCGTCCCGAGCGCCCCTCACCCCCGGG---GATTTGATT

                                                                                        1261
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------------------------------------------TATGCTTGTCTG---------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------------TATGCATGTCTG---------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------------------TCCCCAGGCGAC---------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------TCGCCAGGTGAC---------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ACTAATTGCACTCTCTCCAACTTCACAAGC---------------------------------ATTCCAACCCCG---------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------CATCACCAGTATCCTCTGCATAGTCCTCTTCACCAT
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------------------------------CTAATG---------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------TACCCG---------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------TACCCGCCCGCC---------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------TACCAGGCGGCGGCT------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------------TACCCC---------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------------TACCCC---------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------GAAAGGGGCGTAAGCTTTGGCTCTGAG---------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ---------------------------------------------------------------TAT------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------------TACTACACAAGC---------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------TATTCTGATTCG------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------CTTGAACAGTCAAATCCA------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     GATGCAATTCCAGTTCCGAAAGAGGACATC---------------------------------TCT---AAAACG---------------
Acanthaster-planci_oki169-35_NONE                                                       ACGGCAGCCACACTGCCCCACCGTCCGGCG---------------------------------TTC---ACTTTG---------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------------------GCCCAC---------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------TGCGCCTTCTCAGACCGC------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------TGCGCCTTCTCAGACCGT------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GAACATCTGACTTTTACAGATCGTCGCAGC------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        GATCACCTTGCGTTCTCAGACCGCGGACGT------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------------------TTC---CTTGGA---------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 GCTGGG---------------------------------------------------------TTT---CCACCA---------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------ATG---------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ACGCACTGTGCATCGTCG---------------------------------------------------CTAATG---------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GCACATTGCGCTCCTTCG---------------------------------------------------CTTATG---------------
Ptychodera-flava_PF10086-t1_NONE                                                        TCG------------------------------------------------------------------GTTCAC---------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            GCAGCG------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GCCGCTCTAGCTGGAAGTCCGGCCGGACCGCATCCGGGTCTGTATCCCGGCGGTGGATTGCGCTTCCCGCCGCAC---------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    CAT------------------------------------------------------------------CCTTTC---------------

                                                                                        1351
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------CAACCCATGGGGACTCAAAGCCGCATC------------GGCGAACTATCGTACTCGCTACCATACAGTCAAAAT---------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------CAACCCGTTACCCAAGTCCATCGCCAA------------GATGCCCATGGGTACCAAGAATCGTACACCCAACAGGATACG---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------GGGGTGGACGCGGAACTCTCTCGG------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------GGGGTGGACGCGGAGCTCTCTCGG------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------CCGCCCGCCACTTCGCATAGCCAACAGGTGCGT---CTCGGGGCGGCTCCTTATGCAGATGGGTTCCAGCACCTGTCTCAAACA
Acanthaster-planci_oki20-22_NONE                                                        TTCCAGCAGCCTCGTGGTGGATCCATCTATCAGCCGGACTCCCTTAACCTTTCAGAATACCCCGAAGCAGCTCCCTCGAATCCATCAAAC
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------GCGCCAAATGCAGGTAATTACATATTA------------GGAAAA---------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------AACAGCGGTGCAACTTACTTA------------CACAAC---------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------GGGGGCGCCTTGGTGCCCGCC------------CCGCCGAGCCGCTTCCTTGGAGCCTAC------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------GCGCAGCACGGCGCCGTGTACCAGGCG---------CCCGGCGGGCCGCGCTAC------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---GGGGCGCCCCACGGACCTGTGTACCCGGCT---------CCTAACGGGGCGCGCTAC------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------GGCCAGCACGGACCCGCTCACCCGGCCTTCTCCATCGCCAGCCCCAGCCGCTACATGGCTCACCACCCCGTCATC---------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------GGCCAGCACGGACCGGCGCACCCCGCCTTCTCCATCGGCAGCCCTAGCCGCTACATGGCCCACCACCCGGTCATC---------
Acanthaster-planci_oki58-6_NONE                                                         ------CCGGACGTTGGAAGCATTTCTCCCAAA---------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------CAGCCGGTTTATCAGACAACAGAGAAT---------GACGCAGCTCAAGTCTATCAGACTGTCTACCCGACTCCTGAC------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------------------TACATTTCAAAGTTTAATCCAATTCTT------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------------TATATTTCAAAATTTGACTCAAATCCA------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------GAACCGGAAACA------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------GACCCATCGCGCTCG---------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------GATCCAATGGGTCTTACAAGTCAGAGC------------CAG---------CAATTTGGAGGATACCCTCCT------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------------------TTCGCGACGGACTTCCAC---------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------------TTTGCGACGGACTTCCAC---------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------CATTTTGAAAACTTCGCATCG------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------CATTTCGGGGACTTCCCACCA------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------ACTCCATCAGGA---------------------------------------GCATTTGCTGGATTTCCTCGC------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------GGACCTGTTGGATCA---------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------GGTCCTACGGGCATAAACCCTATAAAC------------GAACAC---ATGTTCTCGAATATTTTTTCTCGC------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------TTCCCGAAAGGTGCGAATTCCGTAGCT------------GGA---------CTGGGATCGGCGTTTGATCGCGGC---------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------TTCCCAAAAGGCGCGAATTCCATAGCC------------GGG---------TTGGGATCGGCGTTTGAGCGCAGT---------
Ptychodera-flava_PF10086-t1_NONE                                                        ------CAGCCG---GGC------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------CACGCT------------CAC------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------CACCCA---GGTGCCCATCCGCACGCC------------CATCAT------CTGGGCAGCGCCTATACTACCGCCGAG------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------CACCCG------------------------------------------------------------------------------

                                                                                        1441
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------AATGGCTACGGATTT.AAA....C---C..A....C
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------TATAAGTACAACGGCTACATGCCACAA..T..TCCCA.TA..AT.
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------TACAACTCGCAGGTCCCTC..---..CT..CCT..AGGA
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------TACAACTCGCAGGTCCCTC..---..CT.CCC...AGGA
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AATCAAGCCCAC------------------------------CGGCAAATATCGGAGATCGAGACCCCTT.A..TA.CG...CA...A.C
Acanthaster-planci_oki20-22_NONE                                                        CCTGGCAGTCACTGCTTCCTCCCTGCGGGGTGCTCCTCTCCAAAAGTCCCATCATCCAACTGCTCGTCTC.G......TTC...GAC.TT
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------GGAGGACCA..G---A.C.T..GCT.AGCT
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------AAGTTACCA..ACC.A.C.TATC.....T.
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------------...TACCC.CCGCGA.CC---
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------------C..TAC.GCTCC.T....---
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------------C..TAC.GCTCCAT....---
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------ACCAACGGC...TATA.C.GCCTC...TCC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------ACCAACGGA...TACA.C.GCCTC...TCC
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------GAGAACCGCCGACGGC...AA..T.TGCGC..T.TC
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------------------------........TCCAACAACCGGA
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------------------........C.G....A..ACA
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------------..A..TC...GC...A..AC.
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------------.....AC..TCA...A..A.C
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------------......C...GC...A..A.C
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------------------.....TC...CC...A..A.C
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------------------..........GC...A.CTC.
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------..........GC...A.CTC.
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------------------..........GC...A.CTC.
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------..........GC...A.CTC.
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------------------.T........GC..A..C.G.
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------------------.TG.......G......T...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------------------..G.......GC.........
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------------------GCCGTGGAGAATGAGCTGCAG
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------------------C.AC.T..T.TCA.AA.CG.A
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------------------------------A.TT.A..ATCGTGTT..---
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------------------------------T.A---..T.G.A..T.AGCA
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------------------..T------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------CTGCCAATTC.GA..CCACGG---------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------TTACCTTTCAA.A..CCCC.CC...A..C.
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------CGGTCAAGTT.G.AA..CTCA..AGA...T
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------------GGGAACGAAGCTATCATAT.A..TA.CG.AC..------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------AATTCAGGTTCGATTTTAA....T..TTCAAGC------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------------------------..TC.C..TGAAGTA
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------------------------C.GC.T..TCCC.GTGA.GCA
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------CTCTCCTCCCATTCT..CC.CA..------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------ATGA.A.C...CC.CA..AC....
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------ATGA.A.C...CC.CA..AC....
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------TTGTCAGGC..A.GA..CTTGA..TCA..T
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------CTTCCCGGACA.A....TC.CA.A.CC...
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------------------------------CTTCAAC.CCCGC.AA.T.CT
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------TTATGCGGAA.TCA..CCC....CT...C.
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------TTGTGCGGG..TCA..GCC.C..TT...C.
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------------------------------------------.GC
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------------------GACGTCGTCCTTGCCTCG.....C.CCC..C.......T
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1531
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        TACTATAGCAATGTATCG---------TACCCCCAGTCCGCTCAGCATCAGCCCGTCTCATCCCCCGTTCACCTACCACCCCCAAACACC
Pinctada-fucata_pfu5110-102705t1_NONE                                                   TACTATGGGGGCAACTAT---------AATGCGCAACCCGCACAGCAT------ACGCAGCAGCAGCAGCAAATGCCCAGCGGGAATAAT
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 CCCTACCCAGGCGCT------------AACCCCGAGAACGCGTACTCCATCACAAGCATGACGCCCTCCCCTCACCCCTACCCAAACGGA
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   CACTACCCCGGTGCGACC---------AACCCCGAGAACGCGTACTCCATCACAAGTATGACGCCCTCCCCACATCCCTACACCAACGGA
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            CATGGTACTGGGTTTACACTTCACTGCAACTCGCAAACAACTTCGTCAGGTTGTAGCAACACGGATGACAAACTTTCTACCAGTGCAAAC
Acanthaster-planci_oki20-22_NONE                                                        TCACTGAAC---------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            AACCTA------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        AAC---------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         CTCGGTGCCGACTACATG------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             CTCAGTGGCAATGTTTCG---------GGC------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             CACGTGATC---------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             CACATGATG---------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                GAA---------------------------------------------------------------------------------GATCGC
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     TCT---------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       TCA---------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    CGCCTCGGG---------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   CGCCTCGGG---------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            CATATGCTA---------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        CACATGATG---------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                CAGATTCCG---------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               CAG---------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            CAG---------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TCA---------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CCG---------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1621
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 TACGAACAACCGCAGATGTACGGGCAACAG------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   TACGACCAACCACAAATGTATGGGCAACAA------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            CACAATCAAATTCAGCAACATCTGCAACAGCAGCAGCAACCGTTGCAGGAATTTGACATGAAGAAAGAACTTGAGCATGGCGGTATCCAT
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------GGAGGAGGA------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                AAGGAGCAAAAAGAA---------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---GAAAGA---------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1711
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------------------------------------GAACCCGCCCTG..ACCG.TA---C..TCCTCG
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------ACGTCATGCGTAT..CC..AT---.G.C.AA..
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------CCGCCGGGTTACTTC..CCCG.TTACC..CTC...T
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------CCGCCTGGCTACTTC..ACCG.T.---..ATC....
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GCACCGCCATTCTTTGTTGAAAACACACCACCGCTGCACCAGACGACAAATACTTTGCCACAGCAGCTCATT...G..---TCTTT...T
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------------------------------------------TCT...ACA
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------------------------------------------CCATC.TCT
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------GCTA.T
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------------------CAG---.C.GCC...
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------------------TC.---TC.GGC...
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------------------CC.---CCCGGC...
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------------------AACTC.TCG---CC.C.....
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------------------AACTC.TCG---CC.C....A
Acanthaster-planci_oki58-6_NONE                                                         ---------------------------------------------------------------------------------TTA.C...A
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------GGTGGCGGTGCTGGT.GC..TGCT---.GC.GT..T
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------------------.T......T---..A.....G
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------------CG.......---........T
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------------CGC..G..T---........A
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------------.ACT.T.C.---A.A.....A
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------------------.ACT..TC.---A....A..G
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------------------.....GTCG---.........
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------.....GTCG---........A
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------------------.....GTCG---.........
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------------------.....GTCG---........A
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------------------..T..G..A---..C..A..T
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------------------..A..G..G---..A..A...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------------------.........---........A
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------------------GCGGGCAGC---GAGAAGGGC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------------------------------------.AT
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------ATG.CT---.G.C.AAA.
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------------------------------.GTATG.CG---TCATCA.AA
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------------------------------------------AT.CCACCT---CGAGTCACG
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------------------------CT.CC...T---CGTCCCAC.
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------------------------------------------AGCGCTCCT
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------------------T.C.AA.ATACGC.ATCC.C.
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------------------------------------.GC...CAA---CT..G..CT
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------------------------------------------------CA.
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------------------------------------------CA.
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------------------------------------------------TCA.G...T
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------------------------------AC..CAACT
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------------------------------------CCCGGC.C.
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------------------------------------------AAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------------------------------------------AAG
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------------------------------AG..T.CTG
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------------------------------CT.------------GG.CA.
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------------------------CT.------------GGACA.
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------------------T.C...---------GGT...
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------------------..C..G---------.C...A
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------------------------------------------TCA
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------------------------------AA.AAAGAG---..AG.AAAA
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------.GTAAA
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------GGCAAA
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------------------------------------------------------TTA
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------GCCTTG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------GC.ATG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1801
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        CCG...G.TGTCCCCTCCGGATCG------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   A.T---------GGCCAAGGAAGA------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 CCT...CAGGCCCCTAACGGACAG------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   CCA...CAGCCCCCTAACGGACAG------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            CCG..AT.G------------------------------------------------------------------TCGCATAGCTTCGGC
Acanthaster-planci_oki20-22_NONE                                                        CG...TG..GCCGGACCGAGGGGGCTAGAA------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            TCA..T...AGTTACTCAAACCAGCTA---------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        TCA..G...GAATTTCAGAGTCAGTAC---------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             TT....GGCGCGGGCGAGTCCTTCCCG---------------------CCGCCCGCGGACGCC---------------------GAGGGC
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              TT.G.GGGCGCCGTGTGCCCG---CCCGGCGGCAGGACGCAGTTC------------------------------------------GGC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  TT....G.GGCTGTGTGCCCA---CCC---GGGAGGGCGCAGTTCGGCCCAGGAGCCGGTGCGGGCAGTGGCGCGGGCGGTAGCAGCGGC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              T....GG.GCCGGGCTACCCCTACCCC---------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             T.......GGCCGGCTACCCCTACCCA---------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         C....AG.TCCTGTTCGAGATTCGCCCGAC------------------------AAAGACGCGGGTCCA---TTGTCGGGGAGACACGGC
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             TCG..ACAGCATGTGACCCACAATGGA---------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            .....A..G---------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       .......GC---------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            .......GC---------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            .....A..G---------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ..T....AC---------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    .....G..C---------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   .....G..C---------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    .....G..C---------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   .....G..C---------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ........T---------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             .....T..G---------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            .....G..G---------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             GACCCCACA---------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                .C...A.GTGAA------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ACGAA.GAG---------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            TCAATTGA.---------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             TTG...GGC---------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             CTG...GGC---------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        .GG..AGGTAAAGGTCACGGGAGAACA---------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                C.T...GAC---------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            .CT...GACGAAGCCTACGCGCGA------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               CCG..GGACTTCGCAAACGCAATT------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            CCA....ATCTTTCTGGTGGGATA------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   CGG..G.AG---------------------------------------------------------------------------ATTGGC
Pinctada-fucata_pfu26-120078t1_NONE                                                     TCA..GG.C---------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       .GG..AGGCGCTGGGGAT------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    .C......C---------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             TC...GT.G---------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              .GT..GG.T---------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    CT....------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   CT....------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            CCG..G..C---------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        C....G...---------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                C.G..TG.TTTGCCG---------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                A.G...------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               CTT..G------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            CTT..G------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        CGA..GGTC---------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            .GT..GTTG---------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CGA..GCTG---------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    AGG..TCTC---------------------------------------------------------------------------------

                                                                                        1891
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------TTTAGC---------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------TTTCAGCAAAAC---------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------TACCCGCAGGGT---TACAACGGG---------AACTACCCCTACCCG---------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------TACCAACACGGT---TACAACGGT---------AACTACCCCTACCCG---------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------CACCATCACAACAGAGCCTCGCATGGGCAGGAGGACGAGAACGCGAAAAGTCATCTCTCAAGTCACATC
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------CTCGCCGGCGTT---CCCAGCTTCCCCATCCCGGGTGCCGAGCAGTGC
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------GCTAATTTTGAGCGAAGT---TACGGCAGT---------AGCCAGTGT---------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------ATCAACATGGATACTGCTGGCTACGGCAAC---------CAACAGGCAACTTTC---------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------TACCAGCCGGGCGAGGGC---TACGCCGCCCCGGACCCGCGCGCCGGGCTCTAC---------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              GGAGGCGGCGGG---------TACCAGTACGGGCAGGCG---GCGGCCGGC------------GGAGCCCTCTACGGC------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  GGGGGCGGCGGCCCGGGCACCTATCAGTACAGCCAG------------GGG------------GCTCCGCTCTACGGG------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------CAGCAGTACGGCCATTCC---TACCAGGGC------------GCCCCGTTCTAC---------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------CAGCAGTACGGCCACTCC---TACCAAGGA------------GCTCCGTTCTAC---------------
Acanthaster-planci_oki58-6_NONE                                                         TCGGCGGCAAGT------GTCATGGAAACTAACGAAGGT---------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------CACGGGCATGGTCACGGG---CTGGGGGGC---------GTGGCAGCGGTAAGC---------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------------------------------------------TGTTGCATC
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------ATGGCTTCAATCGCG---------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------AGAGATCTGGCACAGTGC---------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------TTGAAAATGAAGGAAGGA---------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        1981
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------GGCGGCGGGTCGATG---------------------------TACGGTTACCCCCCGGGCCCTCCC
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------GGCGGCGGGTCCATG---------------------------TACGGGTACCCCCCTGGCCCTCCC
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GTCAGCCAGCCGTACCCTCCG---------------------------------------CCAGCAGGGCACCAGCATGTAGAGGTCGCC
Acanthaster-planci_oki20-22_NONE                                                        TTGCAAGAGCCGTCTCCACAGAGCGAGCGTCTCAGCCCGGAGCAACAGGTA---------------CCGACCGTGGGCTCGTCACCCCCG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------TATCAATCCTCGACTTCAAAC------------------TCAATG---------------GCA
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------ACACACGGATCGCCAACATTCAAT------------------GGCTTACGTCAACCAAACACAGCC
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------CCGGGGCCGCGT---GAGGACTACGCGCTACCCGCGGGACTG------------------------GAGGTGTCG------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------CCCTACCCG------CCGGCCTCGGGCTCCTGCGGTGGGCTC---------------GGGGCGCTGGGGGTGCCGGCGGCC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------CCGTACCCTGGAGCCGCAGCGGCGGGATCTTGCGGAGGACTG---------------GGGGGCCTGGGGGTTCCA------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------CAGTTCTCCTCCGCCCAGCCGGGGCTG---------------------------GTGCCG------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------CAGTTCTCCTCCACCCAGCCGGGGCTG---------------------------GTGCCC------
Acanthaster-planci_oki58-6_NONE                                                         ---------------------------------------------------------------GGTCTCTTGTTAGACGAGCCTATTTCG
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------GGAGGCGGAGCCAGTGTATCCGGAAATGGAGGCCATCGCGTGGTGGGCGGAGCAGGCAGTCCCAAT
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------------------------AATTGT---
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        GTG---------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------GGAAACATTGAAATCAGCACACAA
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------TATATCAGTTCTCAAAATGGCCCG
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------AGG---------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------CCATTCCAAAGTTCGACGCAGGGTACGAGCCAAAGT
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------TATCGACAACATTCTTTCACGAACGCTCCCACTTTA
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------TGTAGC
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------GCCGATAAGGGATCCAACTGCATC
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------TCTCCACAGGCGGCCTTCACCCAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------TCCCCGCAGGCCGCCTTCACCCAG
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------------------------------CAAGGGGAC
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------GCCCCGCAGAACTTCCCCCCGCCC
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------GCCCCGCAGAACTTTCCTCCACCC
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------------------------ATTCCTCACACCGTA
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------------------------ATACCGCCGACCACC
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------GGTCTTCAGCGACAGAATCACAGA
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------------------------------CCACCTGAAGATGAT
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------------------------------------GATAACGAGGACGAT
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------------------------------------GAC---CCCGATGAT
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------------------------------GAC---CCCGATGAT
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------CGGGCGGTGGAAAACCAACCGGAC
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------CATCCTATGGAGACACAAAGTGAT
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------CGGGCGCTTCAGCCCGAGGACGAT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------ATGGAACCCGAACCCGAC
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------CGAGTTTTGGAACCAGAGTCCGAC

                                                                                        2071
Used4treeSearch                                                                         000000000000000111111111111111111111111111111111111111111111111000000000000000000000000111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------.CTT..A.ATATT.ATGCA.C..G..TT.....A.CAAG...C.TC..------------------------.A.
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------A..GCCT..A.TCAG...TGTA.TGCA..A......GCT..A...C.TC.A------------------------.AT
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 CCTCCCCCCGC.A....CA....CTTT..CACCA.TC.G..T..C...G.CAAG..TC.CC.A------------------------.AT
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   CCTACCCCCGCGA.....A....CTT....ACCA.TC.G..T......G.CAAG..TC.CC.A------------------------.A.
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AATGGGCC.G.GA.GGC.TCG..TTA...CTGCA.CC.A..C.......G.AAG..TC.TC..------------------------.A.
Acanthaster-planci_oki20-22_NONE                                                        TCCGGATTCAC.A.GGCATCA...TT...CTGCA.C..T.....A...AGAAAG..TC.C...------------------------.AT
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            AACTCGT.CAA.A.GGCAT.....TAT..TTGTA.C..A..T..C...T..AAA...C.CC.A------------------------.A.
Ptychodera-flava_PF12118-t1_NONE                                                        GGCTTCA.AG.TA..GC.T.T..CTA...CTGCA.TC.A..T......T.AAAA..TC.TC..------------------------.AA
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             GGG---------A.....A.G..C.CG..CA.CA.CCA.CT.T.....TCCAAG..T..TC..------------------------.A.
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              GGGCCC.G..TGCGGGC..AA..CTT...CTGCA.CC.GCC...C.....CAAG...C.CCG.------------------------.A.
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  GGTTCT.GCTT.CGTGCC.A...CTA....TGCA.CC.GCCT........CAAA...C.CCGC------------------------.A.
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              GGC---------A.GGC..AG..CTA....TGCA.C..GCC...C......AAA...C.CCG.------------------------.A.
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             GGC---------A..GCA.AG...TA....TGCA.C..GCCC..T......AAA..TC.CCG.------------------------.A.
Acanthaster-planci_oki58-6_NONE                                                         CAATGC.T.GA..GCA.T.AA..TAC.T.A...A.CTCAAGA..T...AAAATG...G.CA.A------------------------TG.
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             GAACTG..C...A.T......A.CTCG.....C..TC.G.....C........T...C..A.T------------------------...
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------..A..AC....CAAA..CAAT..C.....T.AG...T.A...GG.AAA.....A..A------------------------T..
Acanthaster-planci_oki15-190_NONE                                                       ------...AAG.GG...AAA..CACG........CC.G..C......AG...G....GCA.A------------------------..G
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------...AAA.G...CAAA..AA.A.....C..TGTG..AT.....AAAAAG..TC.CA..------------------------T.G
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------..A..AC.CG.TAAAA.ATCG..A..A..CGTG..AT.A...AAA.....TGG.A.T------------------------T.G
Ptychodera-flava_PF18670-t1_NONE                                                        ------......A.CG..AAGA.TTC.........CGC..........AAA......G..A.C------------------------..G
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------........C...AAG...ACG....GC....AGCC...C...GA.AAG......TC.------------------------...
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------.....G..C...AAG..TAC.....GC....AGCC.......GA.AAG......TCT------------------------...
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------........C...AAGA.ATCT.....A..A.AACCT......GACAAG.....C.CC------------------------T.A
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------.....G..C...AAGA.TAC.........A.AACC.T.A...GACAAG.....C.CC------------------------..G
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------...AAGC.G..C.AG..T.T.T.A.....TGCTCCC..C....A.A.A....GA..A------------------------G..
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------...AAGC....T.AGA.CAT.........TGCACCT..C....A.A.A........A------------------------G..
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------........G..........CG........CG..........................------------------------...
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------GAGCGCGAACTGCGCGTGGGCCTGGAGGAGAGCGAGCTGTGGCTGCGCTTCAAGGAG------------------------CTC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------.CCGATC.GA.CGAG..TAAA..C..A...GAGCCA......AACAAA..TTCCA.C------------------------..G
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------TCATC.TGTG.TAAGA..TCG..A.T...CCAGA.CT.....TCC..T...C.C.CC------------------------T..
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------ACAT.T.C.G.AAAGA...CG..AATA...CAT.GTT.A...TC.A.G..TC.C.C.------------------------T.T
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------AAGTTTA.T..A..TTT...AC.ATCA..TA.TT.A....GT..T..TC.TA.T------------------------..T
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------G..GAGA..AC....C..A.CGA...T..A...AA..AG...C.TC.A------------------------A.T
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------G..GAG.CCAAGT.....A.C.A...TT......AA.AG...C.TA.A------------------------A..
Acanthaster-planci_oki84-25_NONE                                                        ---------------T..G.A.CTTT.A.TCGACT.TTAC.TT.C...------...TCCA.TTTGTTGTCGGTCGTC---------..T
Oikopleura-dioica_GSOIDT00006159001_NONE                                                CAGAAC..C.CGA.T...A.....AAA....CA..A..G..T..T...GACTCT..TG.CA..ACTTTTATTTATCGCTATTTTCAGG..
Oikopleura-dioica_GSOIDT00014261001_NONE                                                GAAGTT.TCGA..G.A.TTC.A...AA..C..TA..C.A..T..T...AGAACA..TT.CAGA------------------------TAT
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------...TCA.CTG.T..AA.TACGT.ATGC..TCAA.C.T.....AAT.AA.....TTC.------------------------A..
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------AAA..TCAT..T..A..TT.GA..T.A...GAA.AA..TTCA.CT------------------------G.T
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               CCTGCG..A.CGA.T....AA..T.AA...TGC..CC.G..AT......AAGAG..TTCAA.C------------------------G..
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            AACTCG..TGC.A.T..TAAA..T.AA..TTGC..TC.AA.AT.A....AAGAG..TTCAA.C------------------------G.T
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------A.T.TACC.A.CGAGTGCAAAT.A....G.TC......A...GC.AAA...TTC..T------------------------T.G
Pinctada-fucata_pfu26-120078t1_NONE                                                     AGAGAACTTGC..G.A.C.AATGCC.AT....AACC.AA..TT.....GACAAA..TC.C...------------------------..G
Acanthaster-planci_oki169-35_NONE                                                       GATGAGAT.TCA.CCG.C..GTGCC.A..T..AACC..G.........GAAAAA..TC.C...------------------------..T
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    CAGGGCAT.GAG.GGA.CAAA...TTTT..C.C...C.G............AAA..TC.C...------------------------G.G
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             CAGGGCAT.GAG.G.A.CAAA...TTT..CC.T..A..A..A........AAAA...C.C..A------------------------G.G
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ACCATG..CAAGA.CA.TAAAA.CAC......AA.CC....C..C...AGCAAA...C.CAGC------------------------A..
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    TCCGCTCTCAAG..CA..AAA..CAC...C..AC...AG..C..C...GACA.....C.C..C------------------------A..
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   TCCGCTCTCAAG..CA..AAG..CAC...C..AC...AG..C..C...GACA.T...C.C..C------------------------A..
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GTGCAGA.CAAA..CA.CAAA..AAA.T....A.GA.AG...T.....ACAAAA...C.C..A------------------------A.T
Ptychodera-flava_PF18712-t1_NONE                                                        GTTCAAA.CAAG..CA.CAAA...ACT.....A.G..AG.....C...GA.AAA...C.CA.A------------------------A.T
Oikopleura-dioica_GSOIDT00004289001_NONE                                                GTTTTT..TGAA..CA.CAAA.CA.AA..C..C..A.AGC.T..T...GACGAT..TC.CA..------------------------A.T
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 GGGGTAACTGAT..T.C.AAA..T.AG..T..T..AC.A..AT.A....AA.AG..TTCAC.A------------------------TGT
Oikopleura-dioica_GSOIDT00007455001_NONE                                                GACGGTCCAGATA.TGCAAAA..CAA...T..AA.T.TG..C..T...GATA.....C.TC..------------------------T.T
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               AACGAACC.GAT..T.C..AA....A...C..CA.T.TG..A..C...GAA.AA...C.CAGA------------------------.G.
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            AACGAACC.GAT..C.C..AG..C.AT..C..TA.C.TG..A......GA..AA..TC.CCGA------------------------.GT
Ptychodera-flava_PF10086-t1_NONE                                                        GAA---..TGAAA.CA.T.AA..CAAT..T..TAC..AG...T.A...GA.GAA..TC.CA.A------------------------.GT
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            GAT---TCTGAT..T.CA.AA..TACT..C..ATCC.AA..A..C...GA.AAA..TC.CA.A------------------------AGA
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GGCGTC.TCGAT..T.CCAAG..CACG.......GC.AA..C......GA.AAG...C.CA.A------------------------..G
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              GCC---C..GAT..T.CTAAA....AAA.A...TCC.AG..A..C...GAA.AA..TC.TA.T------------------------...
Pinctada-fucata_pfu930-101250t1_NONE                                                    GCC---C.AGAT..C.CTAAA....AAA.A...TCC.AA..A..A...GAA.AG..TC.TA.A------------------------T.T

                                                                                        2161
Used4treeSearch                                                                         111111111111111111111111111111000000000000000000000000111111111111111111111111111111111111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ....C...A.....AA.C.....AC.A..A------------------------.....A........AACA..AC..T.C.GTC.AAAC
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ..G.CA.........A.A..A..AC.A..G------------------------...C.......C..TACA..AC..T.C.G.C..G.G
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 GAG.CG..A......A.C.....AC.G...------------------------...C.A...........A..AC..T.TGCGA.A..C
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   GAG.CG..A......A.C..T..AC.G...------------------------...C.......C.....A...C..T.TGC.A.A..C
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            .AG.CA..A......A.C..T..AC.A..A------------------------...C.A........ACA...CGTCT.C..AT..A.C
Acanthaster-planci_oki20-22_NONE                                                        CGG.CG.........A.C.....AC.A..G------------------------C.AC.T........TCAA...GTCT.CCGTT..AGC
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            .A..CG..A.....TA.A..G...C.A..A------------------------C..C.C........AACTT...GTT.TCGTT.CA..
Ptychodera-flava_PF12118-t1_NONE                                                        .A..C..........A.C..A..AC.A..A------------------------...C.A.....C...ACAT...GTT.TCGTT.TA.G
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             CAG.CA.........A.C......C.G..A------------------------C..C.......C..AT.C...TCAT.T.CT...G.C
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              CAG.CG.........A.C......C.G...------------------------C..C...........T.T....GCT.T..TA.TA.C
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  CAA.C..........A.T..G..AC.G...------------------------...C.C........TT.CT...GCT.C...A.AAAC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              CAG.CG.........A.C......C.G...------------------------...C.C.....C..TT.C..A.GTT.T..TA.T...
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             CAA.CG.........A.C.....AC.G..A------------------------...C.C........TT.TT.A.GTT.T...A.T...
Acanthaster-planci_oki58-6_NONE                                                         GG..CC..A..........A..G..TT..G------------------------C..C.......C..ATGCA.CGT.ACAGCGA.ACGA
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             .....C...........C.....A......------------------------...C.C.....C.....CG.....A.C.GT.CC..C
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ..G..C........A..C..A.....T..GAGGCAAGTATTTATACGCGGAAGA.....A........A..CT.C.....C.G.A.CAG.
Acanthaster-planci_oki15-190_NONE                                                       .....C........A..C..T...TC...A------------------------...C.......C..C.....CTCT.CCTC...CA.C
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            .....C..............A..A.G...G------------------------...C.A.....C..A..C..ATCC.CC.G.A.CG.C
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ..A.....A.....T..C...........A------------------------..AC.A........A..C..CCGTA.CTCAA.C..A
Ptychodera-flava_PF18670-t1_NONE                                                        .....C..A........C...........A------------------------...C.T........C..A...CGT..CTCGA.C...
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    .....C...........C.......GT..A------------------------..AC.C.....C..C....................C
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   .....C...........C.......GT..A------------------------..AC.C.....C..C....................C
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    .....C...........C..A..A.....A------------------------..AC.C.....C..C....................C
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ..T..C..A........C...........A------------------------..AC.C.....C..C....................C
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  .....C........T...........T...------------------------...C.......C..T..TT.....A.C.G...C..A
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ..T...........T...........T...------------------------..AC..........A..C..A...A.T.GT..CA.A
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            .....C...........C............------------------------...........C................G......G
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ACCAATGAGATGATCGTGACCAAGAACGGC------------------------AGGAGGATGTTTCCGGTGCTGAAGGTGAACGTGTCT
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ..A..C..A.....T..A.....A..T..T------------------------C.CC.A...........TA.......T.GAACAAAA
Botryllus-schlosseri_botctg002459g63408_NONE                                            ---------.....A.....A..A.G...A------------------------C.AC.T.....C..T..A.....A..T.C..CCA.C
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               GTG..C........A..A..G........T------------------------C.TC.A........A...T....AAC..CGA.AAGC
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            GT...C........T.....A..A..T..A------------------------C.AC.A...........T..T..AACATCGA.TA.G
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            GG..CA........T..T..T..A.GT..A------------------------..A..A........TACCT.ATCA..C.T.A.CG..
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             GG..CG..A......A.C.......GT...------------------------..AC.C.....C..CTC.A..CGAC.A.GT..T..C
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             GG..CC.........A.C..A....G....------------------------C.AC.C.....C..CTC.A..CGA..TTC.C.CAGC
Acanthaster-planci_oki84-25_NONE                                                        .AGCCA.CTGGAC.GA....AGCA.TA...---------------------TCTC.AC.A.........AC.T.TC....C..GA.C..G
Oikopleura-dioica_GSOIDT00006159001_NONE                                                GGA.CA..A......A.C..A..A.C...T------------------------C.TC.A........T.GAA.C..A..C..TA.T...
Oikopleura-dioica_GSOIDT00014261001_NONE                                                GGA.C...A......A.C..A...GTT..A------------------------..A..A........ATCAA....A..C.G...AAAC
Botryllus-schlosseri_botctg005874g48703_NONE                                            GG..CC..A...G.GC...AT..AGTT...------------------------...C.A..A..C..ATC.T.TCGA..C.CGT.T..A
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            CAA.C...A........C.......CT..G------------------------...C.A........C.GCTATCGA..A..AA....G
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               GG..C.........T..C..A..AGCT..A------------------------..AC.A.....C..T.GTTACCGT..A..AA.A..C
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            GGG.CA..A.....A..A..G..AGCA..G------------------------..AC.A........T.GCTATCGA..A..TA.A...
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   GG..CA........TA.C..A..A.GT..A------------------------...C.A.....C..AACAG.T..A..TTC.T.CA.A
Pinctada-fucata_pfu26-120078t1_NONE                                                     GGA.CA.........A.T..A....CT..G------------------------...C.......C..CACC..TCGA..ATCTT.CA..
Acanthaster-planci_oki169-35_NONE                                                       GGA.CA..A......A.T..G..A.CG...------------------------...C.......C..TACCG.CCGT..TTC.T.CAG.
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    GGG.CG.........A.A..A...GCT..A------------------------...C.T........CAGTTAC..A.....G..CA..
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             GG..CG..A......A.A......GCT..A------------------------...C..........CAGTTAC..A.....G...A.G
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              GG..CA..A......A.C.....A.CT..A------------------------...C.A........CACC.....A.....TT..GAG
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    GG..CA..A......A.C.....AGC...G------------------------..AC.A.....C...ACCTAC....C.TC.A.C..C
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   GG..CA..A......A.C..A..AGC...G------------------------..AC.......C..CACCTAC....CCTC.A.C..C
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GG..C...A.....TA.A..G..AGCT...------------------------..AC.T........AAC.T.TCGT.CA.GT..CA.G
Ptychodera-flava_PF18712-t1_NONE                                                        GGT.CC.........A.C..A..AGCT..A------------------------..AC.A........AACTT.TCGC.CC.GT..A..A
Oikopleura-dioica_GSOIDT00004289001_NONE                                                GGA.C...A...G..A.C..T..A.....A------------------------C..C.A........AAGCT.C..A.CA..A..AAGC
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 GGA.C...A...G..A.T..T..A.GT..A------------------------..AC....A..C..A.CATATCGA.....AA.CAG.
Oikopleura-dioica_GSOIDT00007455001_NONE                                                GGA.CA..A...G..A.C..G..A.CT..A------------------------..............ATC.TAC...ACACGA..AA..
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------.....C...TCAT.N..A.....G..AA.C
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               GGA.C.......G.GA.A..G..A.CT..A------------------------...C..........TTCTT.C........G...AGC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GGA.C...A...G.GA.C.....A.C...A------------------------C.AC.A.....C..ATC.T.C..A..T..A...AGC
Ptychodera-flava_PF10086-t1_NONE                                                        GGG.C...A...G..A.A..A..ATCA..A------------------------...C.A..A..C..T.CTTAC..A...CGT..CAGC
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            GGA.CA..A...G..A.C..A...TCA...------------------------C.AC.......C..TTCTT.C..A..CCG...C...
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GG..CG..A...G..A.C.......G....------------------------..ACAA.........CAAA....AT.TCGT..T..G
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              GGA.CC..A...G.TA.C..A..ATC...A------------------------..AC.A........TCCTTAC..A...CG...T...
Pinctada-fucata_pfu930-101250t1_NONE                                                    GGA.CC..A...G.TA.C..A..ATC....------------------------...C.C........TCCAT.T..A..TCGG..T..C

                                                                                        2251
Used4treeSearch                                                                         111111111111111111111111111111111111111111111111111111111111000000000000111111111111111111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ........T...C.TAAGCAA...AA.G.AT.TG.....A.GA.TCT.......CC...T------------.A........T.CAA...
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ..A.....T..GC..AAACA....AA.G..T.TG....TA.GA.TTTA.....TCCAA..------------.A......A.T.CAA.G.
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ..T........GC.T..GCA....AA.G.GT.TG.....A.G...CT...A...GT.A.T------------.A........T.CA....
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ..T........GC.T..GCA....AA.G.GT.TG.....A.G...TT...T...GT.A.T------------.AT.......T.CA....
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ..T..CA.T..A.C.T.GCAA...AATG..T.TG.T...A.G...CT.TGT...CCAA..------------.AG.......TTCAATGT
Acanthaster-planci_oki20-22_NONE                                                        ......A....T.CAA..CAC...AA.G.GT.CG.T...A.G..CCTT..C..TC.AA..------------GCT.......T.CA.TG.
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ..A.......AA.CA..TCAT...AATG.GT.TG.A...A.G..TCTAT.C..TCCAA..------------.A......A.TTCA..GT
Ptychodera-flava_PF12118-t1_NONE                                                        ..A.....T..A.G...TCAT...AATG.AT.TG.T..TA.G..ACT.T.A..TCC.A..------------.A........TTCA..G.
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ..G.....G....C.AG.CAC...AGGA.GT.TG.....G.G..CTT..T....C.G...------------.A....CG....CA..G.
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              .....CA......C....CAC...AA.G..T.CG....GG.G...CT.......CC.A..------------.A....CGC.T.CAAGGG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ..A..CA.T....CT...CAC...AATG.GT.CG.A..GG.G...CT.......CC.A..------------.A....CGC.T.CA.GGG
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ..T..C.......CG..TCAC...AATA.TT.TG....TG.AA.TTT......TCC.A..------------.A.....GA.TTCA.GGA
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ..T..C..T....CG..TCAT...AATA.TT.TG....TG.GA.TTT......TCC.A.T------------.A.....G..TTCAAGGA
Acanthaster-planci_oki58-6_NONE                                                         ...A.....G.G.C..........CG.G.T.A.A....AC.A.AC..CAGC...CGT.GA------------....AC....T.A.C...
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ..T.....T...GC..........A..G....C.....G.....CCA.ATC...TCA..T------------..............C...
Crassostrea-gigas_EKC28765_Brachyury-protein                                            .....T........TT.T......A....A...........T..CCA..T.....CG..T------------..............T...
Acanthaster-planci_oki15-190_NONE                                                       ......A.T..A...............A.......A......AC.C....C...G.G...------------..T...........C...
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            .....C.....G...T.......T...G.......C......TCC..C..A...G.T...------------..............C...
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ..G.....T..A...........T..GG.A..T..A...........C..C.....T...------------...........T......
Ptychodera-flava_PF18670-t1_NONE                                                        ..A..T..T.................GG.T..CT..........C..TT...........------------..T...........C...
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ..G........T..............................AC...C..C.........------------..............C...
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ..A........T..............................AC...C..C.........------------..................
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ..A........T..............................AC...C..C.........------------..............C...
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ..A........T..............................AC...C..C.........------------..................
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ...T.......A..T........T..T......T.A.....T.CCC..A.T..TGG....------------..............C..T
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ..GT..........T............C.............T..CC.TA......GT...------------..............C...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ..G...............................................C...GGG...------------..............C...
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             GGCCTGGACCCCAACGCCATGTACTCCTTCCTGCTGGACTTCGTGGCGGCGGACAACCAC------------CGCTGGAAGTACGTGAAC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ..T..T..TGAG.....A......A..G....C..T.....TACC..A..C.....T...------------..T...........C...
Botryllus-schlosseri_botctg002459g63408_NONE                                            ..A.....A..T.CTT..........G....ATT.AT.T..T.CCT..T.....CTG...------------A.A........T..C...
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ..G..T..T..G.C...A.........G.TA....C..T.....A..A.TC......A.T------------A.A.....A..T.....T
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ..A..T..T..A.CT..G.....T...G..A....T.....T..AC.C.T...T...A.T------------A.A.....A..T......
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ..T..T..T...GTGAAG.GT..TGTAG.TA..G.A..T..G.A.TGTATT..A.TGA.ACGTTTT------..A.ATTCA.TTCATC.A
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ...T....GGA.G.GAG..AC..T.G.G.G..C..C..GA.G..AC.CATT.G.G..TG.------------....AC....T.TCCGG.
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ..A.....GGAGG.G....GC..T.G.G.A..C..C..GA.G...C.CATT.G.G.TTG.------------....AC....T.TCCGGT
Acanthaster-planci_oki84-25_NONE                                                        ..AA....T....TG..GGAA..TATAC..A..A....T..T..CC...TA...G..A.GAGGTAC------..G.ATGCC.T.CAC.GT
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ..AA....AG.GC.T.AA.AT..TGTTG..A.TT....T....CAAAC.TT...G.AA.A------------....AC..A.T.TCCG..
Oikopleura-dioica_GSOIDT00014261001_NONE                                                .....C..T..TC.AAAG.C...TG.GA.GA.TT.A...A..C.AC.A.TC...G..AGTCGATAT------..A.ACGTT...AATTCT
Botryllus-schlosseri_botctg005874g48703_NONE                                            ..AT....G..ATG...GCGC..TAAAA..A..A....TG...AAAGA.TC...G.GA.T------------....AT....T.CA.G.T
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ..AA.......G..T..TCAA..T.G.G.A...A....TA.TTC.AGC.T....G.AA..------------A.A.AC....TTCAAC..
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ..AA....T..G...A.TCA...T.G.G.AT..A....TA.A..CAAC.T....G.G..T------------A.A.AT....TTCA.C.A
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ..AA....A..GG.T..T.AT..T.G.G..A..A.....A.T..AAAC.TA...G.A..T------------A.A.AT..A.T.CA.C.A
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   AATG.AATA.TAG.T..TC.A..T.ATA..T.C..A..TG.A..CC.A.T....TC.A.AAGATAC------..T.AC.TC...AAC..A
Pinctada-fucata_pfu26-120078t1_NONE                                                     ..TA.A.....GG.A.TACGA..TATGG.....A....TA.A..CC...TT......A.GAGATAT------....ACGCC..TCACCGA
Acanthaster-planci_oki169-35_NONE                                                       ..AG.A.C.G.AG.G...CGC...GTTG..A..T....TA.A..TC.CCTT..T...A.ACGCTAC------A.G.ACGCC...CACCGT
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ..A..CA.T..A..AA.G.A....ATAC.GT..A....TA.T..AC.A.....TG.....------------A.A.AC..A.TT.CAG.T
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             .....TA.T.....AA.G.A....ATTC.T..CA.....A.T..AC.T..C...G.T...------------A.A.AC..A.T..CAG.T
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ............C..T.T.A....ATTC.....A.T...A.T...C.C.T....G..TGT------------....AC......CAC...
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ..A........G.......A....ATTC.T..CA.....A....AC.CAT....G..A..------------....AC.....TCAC...
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ..T........G.......A....ATTC.T...A.....A....AC.CAT....G..A..------------....AC......CAC...
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ..T..A.....AC......A....AT.A.G...A.....A.....C.A.TA...G..AC.------------A.A.AC..A..TCAC..T
Ptychodera-flava_PF18712-t1_NONE                                                        ...T....T..GC......A....ATAA.G..AA.....A.A..AC.C.TA...G..ACG------------....AC......CAC...
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ...........GCGA..A.AC...GTGA.GA..G.T...A.G..CC.C.TC...G.GA..------------....AC....TTCAC...
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ..T..C...AAG..AAGTCAA..T.T.G.GA..A....TC.T..TC....T..TG.A...------------..T.AC....T.AAT..T
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ..G..CA.T..T..A....A.....GTA.GT.AA....TA.TTCT..C..T...G.G.CGAGCCTTTCTCGA..T.AC..A..TCAC..T
Botryllus-schlosseri_botctg007226g53212_NONE                                            ..NT..A..AAG.......A....AT.A.G...A.....A.T..C..C..C...G..TG.------------..G.AT..A.T.CAC..T
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ......AG.AAA.G.....A....ATAA.G..CA.....A.......T.....TG..TG.------------A.A.AT..A.T.CAC..T
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ..AT..AG.AAA.CT....A....ATTA.G..CA.....A.....T....C...G..TG.------------....AC....T.CAC...
Ptychodera-flava_PF10086-t1_NONE                                                        ..G......AAG..G..T.AA...AT.C.G...A.....A....T..A..T..TG..TG.------------..T.AT....T.CAC..T
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ..G.....TAAG..A....AA...AT.C..T..A.....A....C..C..C...G..TG.------------..G.AC....T.CAC..T
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ..A.....TG....G..T.AA...AT...G..A......A.T............G.TT.T------------..T.AT..A.TTCAT..T
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ..T.....TAAG.GA..A.AA..TATT..GT.AA.....A.T.....A.TT...G..TG.------------A.A.AC..A.TTCAT...
Pinctada-fucata_pfu930-101250t1_NONE                                                    ..TT.A...AAACGT....AA...ATAC.T..AA.....A.A..C..A.TC...G..TGT------------A.G.AC..A.T.CAC...

                                                                                        2341
Used4treeSearch                                                                         111111111111111111111111111111111000111111111111111111111111111111111111111111111111111111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ..CA..........AT.C..AC..G.A..A.A.CTCTC.CAAAA.G.GC.T.....TC.G..T..G.....C..T.GT.C...T......
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ..AA.......T..AT.T..AC.AG....A.AATTA.CACA.GTTG.TC.A......C....T..T..T..T..A.G.AG...TT....T
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ...A...........T.T...CG.G.T..CA.CAAC.CACAAGGA...C.G..T...G....T.....G..T..T...AG...A..A...
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ...A.G.........T.T..GCG.G....TA.AAAC.C.CAAGGA...C.A..G...G.......A..A..C..T...AG...C..G...
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ..TA.....A.A...T.C..GC..G.C...AACATC.CAAAAGTA...AA.A....TC.T..T..T..T.....T.G.AAT..ACTG..T
Acanthaster-planci_oki20-22_NONE                                                        ..CA.G......G.CAC...G...T....CGGAGTG.CTCGAG.T.CGG.TA.T..T.AA.....A..T..C..A...ACT..T.AA...
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ..TA..........TT.T..TC.AG.C..A.ACGTA..TC.TGGTTC.AATA.T...........T.....T..T..TACT..TT.....
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------GGTTCAAATA.T..T..............T..G...ACT..TAAT..T
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ..CA.G.......A.T.T..A...G.C...GGCAGCAT.C.AGGA.A.C..C.G...G.......G.....C......ACA..A..G...
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ..AA........A..T.C.....AG.C..CAACAACAT.CA.GG..A.AAG..G...G.G.....T..G.........AC...A..G...
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ..CA........A.CT.T.....AG.C..CAATAACAT.CA.GG..A.AAAA.G..TG.T.....A..G..T..T..TACT..TT.....
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ..CA.......T..TT.C.....AG....CA.CAATGTACAAGGG.A.C....G.....G...........C......ACG..A..G...
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ..CA.......T..TT.C.....AG....CA.CAATGT.CAAGGA.ATC.G.....T..G..T..G..T..C......ACT.....T...
Acanthaster-planci_oki58-6_NONE                                                         ..CA.G...C....C.T...T..AG.A..C..C---G..A.CAGT.A.CAGCC..T.GAA........T..C......C.G..C...TTT
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ..T........T..T..T......G.A...GTT---.CCC..T.A.ATCC.A.....G.A........G..T.....T..T..A......
Crassostrea-gigas_EKC28765_Brachyury-protein                                            .....C.....CG.A.....T...G.......C---GCC..A....A...T..G..T..............C..A.....T..A......
Acanthaster-planci_oki15-190_NONE                                                       ..C..G.....A..C..A..A........CT.T---.CTC........ACG.C............G.....A...........C..G...
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ..C..G...A.C..C..C........C..CGGC---TC.C.T..G.C.AC..C.........T...........A........C..G...
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ..T...........C..C..T..A..C..AG.C---GCT..A..G..T.CT.....T..A.....T..T.....T........A......
Ptychodera-flava_PF18670-t1_NONE                                                        ..A..G........C..C.....A..A...G.C---GCT.....G....CT.....T........A.....A..G.....T..A......
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ..C..G.....T..C..C........C......---TCC.T...G....................G.................C..G...
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ..C..G.....T..C..C........C......---TCC.T...G......................................C..G...
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ..C..G.....T..C..C........C......---TCC.T...G....................G.................C..G...
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ..C..G.....T..C..C........C......---TCC.T...G......................................C..G...
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ..A...........A.CT..G..A..A.....A---.CAAAC.A......T..............A..T..T........T.........
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ..............C.CT........A...GTC---TCCAGC.A...............T.....G.....C........T.........
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ..C..G...........C...............---...............................................C......
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             GGGGAATGGGTGCCGGGGGGCAAGCCGGAGCCG---CAGGCGCCCAGCTGCGTCTACATCCACCCCGACTCGCCCAACTTCGGGGCCCAC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ..C..G........C..C..A..A..C..A..A---....TT..TTCA.C...T.....G..T..............T.....TT.G...
Botryllus-schlosseri_botctg002459g63408_NONE                                            ..A..C...A.T..T..T........A..A...---..TA.T..ACCT.....A...G.G..T..G..T.....G..T.....C..A..T
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               .....G.....A..A.....A..A..C..A...---..T.T.A.GTCA..T.CA..............T.....A.....T...T.G..T
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ..T..G...A.C..C.....A..A..C..A..C---..T.TTT.GTCA..T.CT..T..T........T..A........T..TT.G...
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            A.CA.....A.TT.TACC..TCCAGG...AAGT---G.ACTC..G...A.AA.G.TTG.T...A.G.....C..AGCTCGT..T..T..T
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             TCCC.G.....T..A.CC..AGGAG.C......---..AAGT...CAGC.GA.G...C.G..T..G...AGT..GGC.AC...T.....T
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             TCCC.G.....T....CC..AGGAG.C.....C---...AGT..GCAGC..A.G..TC.G..T..G...AGT..GGCGAC...T.....T
Acanthaster-planci_oki84-25_NONE                                                        TCAAGC...C.CGT..C.......G.C..T...---G..AT...GG..C.TA..C..G.......G........GGC.CGG..C..TATG
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ..C..G...AAATTA..C..ACG.TGC.....T---A.TCAT..A.AAC.AT...TT..T..T..A..T..A..A..TACT..AT.T...
Oikopleura-dioica_GSOIDT00014261001_NONE                                                TCAA.G.....TT...TT..A..CG.T..TA.A---A.TCT...AGAAC.A..T...G.T..T..A..A.....AC.GAAG..AT.AG.T
Botryllus-schlosseri_botctg005874g48703_NONE                                            ..TCG....A.AGTC.C...A.GAG.T..CTT.---.CTTAC.A.CAACAA..T.T.G.G..T..ATTG...T.GTCAACT..C.AGG.T
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            .....G......GTA.C...TCGAGGA..A..C---..A.TT..GCAGA.AT.T..TT.A......A....A..TTG.AG....CAA..A
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ..A......A..GT..C...A...GGC....T.---..T..C..GCAGA.AA.G.TTC.T...T....TAGT..GGCAACA..CAG.A.A
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ..C......A..GT..CA..T..AGGA....TT---..TT.A..ACAGA.AA.G.TTC.T..T..T..TAGT..ATCACCG..TAGAA.A
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   TCA.CT...C.CA.A.CC..T..AG.......T---GT.C.AAAA.ATC.ATAT...C.T.....G.....C..ATTTAC...T.AT..A
Pinctada-fucata_pfu26-120078t1_NONE                                                     TCTTCC...T.AGTC.CC..A..AG.A..C..A---.CACTA..T.CGC.GC....T..G.....A.....C..GT..ACA....AA..A
Acanthaster-planci_oki169-35_NONE                                                       TC.TCT...T..GTA.CT......G.C..C..T---.CTTT...TCCAC..C.T...G.A.....T.....A..GTT.ACT..C.A...G
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    AATA.....TCCGT.ACC..G...G.A..A...---GCCAT....G..C..C.....G.G...........C...GCTACT..A......
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             AATA.....TCTGT.AC......AG.T.....C---GCCAT...TG..C..C.G...G.G.....A.....C...GC.AC......G..T
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              TCA..G......GTCACC..A..AG....A..A---..CAT....G.GC..C...................C..GGC..C...CT.....
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    TCC.........GTAA.C..T..AG.......C---.T.AT...GG.TA.AC.G..............TAGT...GCTACA..CA.G..G
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   TCC..G......GT.A.C..G..AG.C.....C---.TAAT...GG..A.AC.G...........G...AGC...GC.ACA..CA.G..G
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            TC...G.....AGTAACC..T...G.C..A..A---..TAT....G.AA.AC.G........T...........GGCTACG..A...GTG
Ptychodera-flava_PF18712-t1_NONE                                                        TCC..G.....TGT.AC.......G.C..A..C---..CAT....G..A.AC.G.....T........T.....GGC.ACT..C...GTT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ...CGC...C.AGTC.CC..A..AG.T..T...---G.AAT..ATCCAC.AA.G.T...T.....A..T......TG..C...TT.G...
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 A.TCG....A..ATT.CT..A..AG.C..T..C---G.AAT...A.AAACTT.G..T..T..T..G..T..T..GTCAACT..C.AG..T
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ACACGG...A..GTC.CA.....AG.C..T..T---G..CTT..A.AGC..A.G..TG.G.....A........GGCAACT..A.AA..G
Botryllus-schlosseri_botctg007226g53212_NONE                                            TC.AG....A..GT..C...A..AG.C..C...---G..CTA..G.AGA.AA.G...........G..T..T..GGCAAC.....AA..G
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TCAAGG...A..GT..CT..A...G.C..C..A---G..TT...A.AAC.AA.G.....T.....T..T..A..AGC.ACA....TG..G
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            TCTAG....A..GTA.CA..G...G....C..C---G..CTC....AAA.GA.G...........A.....C..GGCAACA....AG..A
Ptychodera-flava_PF10086-t1_NONE                                                        TC.CGC...A..GT..CA..G..AG.A..C..A---G.AAT...G.AGA.GA.G.....T.....A..T......TG.ACG..A.AG..G
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TCCCGC...A..GT..CA......G.C..C..C---G..AT.....AAC.GA.G.....A.....G.....A..G.G.AC...C.AA..A
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 A.TCGC...A..GT..CT.....AG....T..C---G..AT...A.AAC..A.G..T.....T..A..T.......CAACG..T.AG..A
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              A.CCGC...A..GT..C...A..AG.C..C..A---G..AT.....AAC.GA.G.................C..A.G.ACT....AA..A
Pinctada-fucata_pfu930-101250t1_NONE                                                    A.TCG....A..GTC.CC..G...G....T..A---G.AAT...G.AGC.GA.G.................C....G.ACG..C.AG..G

                                                                                        2431
Used4treeSearch                                                                         111111111111000111111111111111111111111111111111111000111111111000111000111000000000000111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        .........CAG---GATA.AGTG..TG.G..GC.G..A..G........T---.GAGCTCTGGACCAA---...CAAGTCAGC.....T
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ........ACAG---TA.A.TGTT..TG.A..GC.G..A..A..A..T..C---AGA..TAACGATCA.---...---------..T...
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ........ACAA---GAA..GGT..........C....A...........C---AAAGG..CCGACAAC---..A---------..TG.G
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ........ACAG---GAA..GGT.........GC....A...........C---AAAGG..CCGACAAC---..A---------..TG.G
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ......C.TCAA---GA.A..GTT.....T..GC....A..G.....TC.T---.GGGCAAA.GACAAT---..ATTT---------G.G
Acanthaster-planci_oki20-22_NONE                                                        ......CGACAA---GA.A..G.T...TC...GC.G..A..A........C---AGGGG.AA.GACA.T---..ATAT---------C.T
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ........ACAA---GAA..GGTA..TG.T...T.G..A..A........C---AAAGGAAA.GAACAT---..TCAT---------..T
Ptychodera-flava_PF12118-t1_NONE                                                        ........ACAA---GAA..TGTT.........C....A..A..G.....T---AAAGGAAA.GACAAT---..ACAT---------...
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ......CGCCAG---GAA..T..A..TG.G...C.A........A.....CAAGGGGGCGTCCAACAATGTGAC.CAG------AT...T
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ......CG.CAG---GAGA....T...G....GC.G.....G........CAAGGGAGC.AACAACAACAAC.CGCAG------AT...A
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  .......GACAG---GAGA.T..A...G.G...T.A..A........T..CAAAGG.GCAAATAACAACAACAC.CAG------AT...A
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ......CGCCAG---GAGA........G.G..GC....A.....A.....TAAAGGAGCATCGAACAACAAC..GCAG------AT.G..
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ......CGCCAA---GAAA....T..TG.A...T.A..A..T..G.....CAAAGGAGCTTC.AATAACAAT..GCAG------AT.G.G
Acanthaster-planci_oki58-6_NONE                                                         ......C.A.AC---AGG..G......GC...GC.T...A..........CAAGGAGGGT...---------..GGAT------A.C.CT
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ..........AG---...A....G..TGC......A.....G.........---AC...T..C---AAT---..A---------.....A
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ........A.AA---A....T...........G.....AT.A........A---........C---...---..G---------.....A
Acanthaster-planci_oki15-190_NONE                                                       .........CAG---TG...G..T...........G.....GT.T.....A---..G..T..T---ACA---..A---------......
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ........ACAG---G.....AA............G...T.GT.G.....A---.........---A.C---..G---------...G.G
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            .........CAG---T.T..TAAT.....T.....G..A..A..A..T..A---........C---..C---..G---------..T...
Ptychodera-flava_PF18670-t1_NONE                                                        .........CAG---G.GA....A...G.G.....T.....T..G......---..A.....T---..T---..A---------..T...
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ........AT.A---..T..G...........G.....A...........A---.........---..T---..ACAG------.....A
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ........AT.A---..T..G...........G.....A...........A---........T---..T---..ACAG------.....A
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ........AT.A---..T..G...........G.....A...........A---.........---..T---..ACAG------......
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ........AT.A---..T..G...........G.....A...........A---........T---..A---..ACAG------......
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ........A...---G..A...................A..T.........---.....T..G---A.T---..G---------.....A
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ........A...---...A................G.....G.........---.....T...---..C---..G---------.....A
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ...........G---.................G..................---........C---..C---..G---------......
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             TGGATGAAGGCT---CCCGTCTCCTTCAGCAAAGTCAAGCTCACCAACAAG---CTCAACGGA---GGG---GGC---------CAGATC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ........ACAG---..TC..AG....TCA.....A..AT.G........A---..T..TCAGCACAAC---...CAG------......
Botryllus-schlosseri_botctg002459g63408_NONE                                            .........CAA---..G...AG.....AT.....G..A..G..T.....A---GGA..T...---..A---A.TCAA------..A...
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               .........CAA---..T..AGG........GG..G........G......---GCT.CT...---AAC---.CACAG------..A...
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ........ACAA---.....TGGT.....TCGC.....A..T..T..T..A---GCT.CA..G---AAC---CC.CAG------..A..A
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ......CG....---..T..TAGT..TGAT...A.G.....A..A.....T---.AGCTG.ATAACAAT---..ACAT---------..A
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ...CA.GC.CAG---...A.ACTG....AT..G......T.G.....T..C---ACGCTG.ATAACA.C---...CAT---------..T
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ...CAATCCCAG---G.AT.GCT.....A...G.....A..G........T---ACACTG.ACAGCA.C---..ACAT---------...
Acanthaster-planci_oki84-25_NONE                                                        ........ACAG---AT...G......GA....C....A..G.....T..C---..GCTG.ACGATAAT---...CAC---------..T
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ...CA.C..AAA---A.GA.T..A..TC.TGGC.CG..A...........TCTGG...G..ACCCAAAC---------------AT....
Oikopleura-dioica_GSOIDT00014261001_NONE                                                .......GAT.A---.TT...AA....GA....C.A..A.....A.....C---GAA....ACACAAAA---..GCAA---------...
Botryllus-schlosseri_botctg005874g48703_NONE                                            ATC.....TAAG---AT...A......CA......G..AT.A.....TTCACCGT.G..GCTGCAAAAC---...AAG---------T.T
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ........A.AA---ATTA.T..G..TCAT.....A..A.....A...TCT---TGTGGAAACTCA.CTGAT..GAAG---------T..
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               .......CC.AC---ATT..T..T...TA...GA....A..G..G..TTCT---A.A......AGGTC.ACG.ATAAG---------..T
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ........T.AC---ATAA.T..T..TTAT...A....AT.AT.A...TCC---G.A.....TCGATCCACA.A.AAG---------...
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   CT.C.....CAC---GTGA.T..G..TGAA..GACT..AT.G..A..T..C---GAGGTG.ATAAGAC.---..TCAT---------C.A
Pinctada-fucata_pfu26-120078t1_NONE                                                     CTACA...ACAA---A.A..G..A..TGAA...T.A..A..G.....T..C---A.GCTG.ATAAAAAT---..ACAC---------..A
Acanthaster-planci_oki169-35_NONE                                                       CT.CAA.G.CAG---ATG..G..T...GAG....................C---GAGC.G.ATCAACAT---..TCAC---------...
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    .......G.CAG---TTG..T......CAG..GC................C---.A.CTT.ACCCCTTC---..ACAT---------...
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             .......G.CAG---.T..........CAG...C................C---.A.CTG.ACCCATTT---..GCAT---------..T
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              .........CAG---..AA.GAG....CA...GC.G..A..G........C---AATCTG.ACCAGAAT---..ACAC---------..A
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ........ACAG---T.A..TA.....CA....C....A..T........C---GC..TG.ACCAGCAA---..GCAT---------...
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ........ACAG---AG....A.....CA...GC....A...........C---GC..TG.ACCAGCA.---..ACAT---------...
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ........ACAA---GTT...AG...TCAT...A.G..A..T........T---AA.CTT.ATCAACAC---..ACAC---------..T
Ptychodera-flava_PF18712-t1_NONE                                                        ........ACAG---GT....A.A..TCA...GA.G.....A..A.....C---AA.TTG.ATCAACAC---..ACAT---------..T
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ......TC.CGCCCGAATA.T..A..TCA....A.G..A.....A.....T---A.TTCT.ACAGATCT---...TCG---------.CG
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ......TCAAAA---GG..C.AA...TCA....C....A.....A..T..T---A.ATCG.ATAAGCAT---..ATAT---------.CA
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ........CCGGCCATG.A.......TCA....C.G..A..G..G..T..T---A...CT.ACCCGCAT---..ACAT---------.CG
Botryllus-schlosseri_botctg007226g53212_NONE                                            ........CAGACCCGG...T..G...CA...GC.G..............C---A..GCG.ATCCGCAC---..TCAC---------.CA
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ........TCGACCCGGA..G..G...CA....C....A...........C---A.AGCG.ATCCACAC---..TCAT---------.CA
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ........TCGACCAGGA..G..G...CAT..GC................T---A..GCG.ATCCTCAT---...CAT---------.C.
Ptychodera-flava_PF10086-t1_NONE                                                        ......C..AAA---TTG..G.....TCA....C.G..A..G..A.....C---A..TC..ATAAACAC---..ATAC---------.CG
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ......C..AAA---TGT.....A...CAT..GC....A........T..C---A..TC..ACAAGCAT---..ATTC------....C.
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ......C..AAA---GTT..T..A..TCA....T.A..AT.G........T---A.T.GT.ATAAACAT---..ATTTGTAAGTACT.CG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ......C..AAA---GTG.........CAT..GC.G..A..G.....T..C---A.TTCG.ACAAGCAC---...TAT---------.CG
Pinctada-fucata_pfu930-101250t1_NONE                                                    ......C..AAA---GT...T......CAT...C....A..G........C---A.TTCG.ACAAACAT---...TAT---------.CG

                                                                                        2521
Used4treeSearch                                                                         111111111111111111111111111111111111111111111111111111000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        G.TT.......AA.......A..CC.A..A..T.....TG.TA.TGA...C..CTCA---------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   G.T..A..T...A....C.....CC.......T..T..TG.TA.CGAG..C..CTCG---------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 G...........A....C.....CC.A..C..CC.G.....CA.CGAG..GACCAAC---------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   G...........A....C.....CC.A..C..GC.G.....CA.CGAG..GTCTAAC---------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ..CT.A.....GA....CC.....C..........T...G.TC.AGAGT.GA.TGAG---------------------------------
Acanthaster-planci_oki20-22_NONE                                                        G..A.T.....TA....C.T....C.A.....G......G.CT..GACC.GACAGGA---------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            G..T.......AA....C..A..CC.A..CA........G.GA.CGA...GA.CCCT---------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        G.TT.A.....GA....C......C.A..A..T..T...G.GA.CGA...AA.TCCA---------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             G....CC.G...C.C........CC....C..GC.G..T..C..TGAG..GAACGAC---------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              G.C...C.G..TC.A..C.....CC.......GC.T.........GA...GACTGAA---------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  G.CT.AC.A.....A..C..A..CC.A..C...C.G..T..T..TGA....ACAGAG---------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              G.C...C.G...C....C.....CC....C..CC.G...G.G...GAG..GAACGAG---------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             G.TT.AC.G........C.....CC....C..CC.G..TG.G...GA...GAACGAG---------------------------------
Acanthaster-planci_oki58-6_NONE                                                         G.T..CC.T..GA.......A..CACA...T.C...AT...CAGC.AGT.GA..CGTTGGCCGGCCAACGTGAGGGGCATAGGGGCACCG
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             .....A..T..G.....C.....C..A..A..TG.G..TC.G..TC.C..G..TTCC---------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            .....C.....TC.......A..C..A..A..CC.G...T.G..A.A...A..A------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ...T.A.....AC.C..C.....C.....C..T......G.CA.AC....C..T------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            .....A......C.T..C.....C..A..A..T........CA.AC.T..C..A------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ......C.T..TC.C.....A..C..A...A..G.T..T..CA.C.A......A------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        .....AC....TC....C..A..C.....A...G.......TA.C.A...C..C------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ...T.....AG.C....C...........G..C........C....AG..G..A------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   .........AG.C....C.....C..A..G..C........C....AG..G...------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ...T.....AGTC.T..C.....C.....CA..C.T.....CA.C.AG..G..C------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   .........AGTC.A..C.....C.....CA..C.G.....CA.C.AG..A..C------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ...T........C.......A..C.....C.AGG.A........TC.T..A..A------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ...T....T..TC.......A.....A..C.AGG.T.........C.T.....A------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            .....C......C....C.....C.....C..C........C...C.G..G..C------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ATGCTGAACTCCTTGCATAAGTATGAGCCTCGAATCCACATAGTGAGAGTTGGG------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                .....CC....TC....C..A..C.....G...G.T.....CA.C.A.A.C..CGGT---------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ........T..AC....C..A........A..T..T..AG.G..C.A......AGTC---------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ...........GC.A..C..A..C..A..C..G........CA...A...C..C------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ...T.......TC.......A..C..A..CA.G........CA..C.C......------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ..TG....T..AA....C..A...CGT..AA..G.T......A.TGA.CAA.ATGAT---------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             G.C...GC.AG.A....C......C....G..TC.G...G.CA.AC.CACC.CTGAT---------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             G.TT..GC.AG.A..........CC....A..CC.G.....CA.CC.CAGCA.CGAG---------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ..CT........A....CCGC...C....G..GT.....G.G...CAC..GA.CGGT---------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                G.C.....T..AA....C..A..CCGC.....TG.G..T..CA.T.A..CAAATTCT---------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ..C...C.T..GA....C..A..CC........G.....G.C..CGAGA.CCCAGAA---------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            C.T..CC.T........CCGC..CC.A.TC..CG.GT....C.CA..GTGC.ACAGT---------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            C.CA.AC.....A.....CG...CC.A.....T........C..TC.TAC..ATGAC---------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               G.T..C.....AA.....CGA...C.A.....TG....T..T..TC..AC..ATGAC---------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            G.T.........A.....CG....C.A.....T........C..TC.TAC..ATGAC---------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ..C..A.....AA....C..A..CC....A..T..T.....T..CCA.CGCCA.AAA---------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ..TT....T..GA....C..A..CC.A..A.....T........A.AGAAGAA.GAGGGG------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ..T..C.....GA....C.GA..CC.......GG.G.....C.CT..GAAG.C.GACGCC------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ..C.........A....C..A..CC....C..GC.......C....AG.CG.ATGAG---------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ..T..A..T...A....C..A..CC.....A..T.A.....C....A..CG.ATGAA---------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ..T.........A....C.....CC........G.T..TG....ACA..CCAATGAT---------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ..C........GA..........CC....C..TC.G.....C..CCAG.CGAACGAC---------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ..C.........A....C.....CC....C..CC.G.....C..CCAG.CGAACGAT---------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            G.A........GA....C.....CC.......CT.......C...CAG.CCAATGAC---------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        G.A.........A..........CC.......TT.T.....T...CA..CAAATGAC---------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ..T........AA....C..A..CC.......CT.....G.G.CCC.CTGC.ACGAT---------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ..T..C.....TA....C......C....A..TC.T...G....TC.GTGC.C.GAT---------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ..T..C.....GA....C......C.......TT.T.....C..C..GTGCAACGAT---------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ..T..C......A....C..A...C.A.....CT.....G.C...C..TGC..CGAC---------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ..T.........A....C......C.......TT.....G.T..TC..TG...AGAC---------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ..TT.......AA....C.....CC....A..CT.....G.T.....GTG....GAC---------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ..C..C..T..AA....C..A..CC....CA.GT.T........T.A..CAAACGAC---------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ..A.....T..GA....C.....CC.A.....TT.......C..C.AG.CCAACGAC---------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ..C........GA....C.....CC....G..TT.....C.G...C...CCAATGAC---------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ..T..C..T...A....C.....CC....A..TT.T..TC.C..TC...C.AACGAC---------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ..C.........A....C......C........T.T..TC.C..CC...CAAACGAC---------------------------------

                                                                                        2611
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000111111111111000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------CAT..C...AATGAA------------------------------------...AAA.GTC..CAG
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------TGT..A...AACGAC------------------------------------...AAG.ACC.TCAG
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------AGA..CGGCGGCGGC------------------------------------G.....G.TC.ACAG
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------CGA.CCGGCGGCGGC------------------------------------G.....G..C.ACAG
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------------------------------------------AGC...TCT...CAA
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------------------------------------GCC..GG..C.TCAG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------AACA.A..TCCAGAC------------------------------------...A.A.CTT.ACAA
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------AATC.....CCTGAT------------------------------------...A.A.C.T.GCAG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------GGA.AG...GAGGCAGCCTGC---------------------------AACGCTTC..AC.CGCAT
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------GAT..CGTTGAGGATCTGAAT---------------------------GATTCTTCA.A..CTCAA
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------GAT..CGTGGAGGACTTGAAT---------------------------GAG.CCTCA.A..C.CAG
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------GAC..CA.GGAGGACACCAAC---------------------------CAG.C.G...G.G.GCAG
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------GAC..CA.GGAGGACACTAGC---------------------------CAG.CCG..CGCG.GCAG
Acanthaster-planci_oki58-6_NONE                                                         TGTTCCGATCCCAATCTGCCGACGGAC..CAGTGTTACGAAACACCGTGAGCTTGCGTCTTTGCCCCCT---GTTGGTG..CG.CCGG.G
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------GAG---------------------------------------------------.....TCACG.GGT.
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------.CGAACTCCCAG------------------------------------A.AAAGCGC....G.
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------..G...GAGAAA------------------------------------.....TC.C...CGT
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------..CAGGGAGAAA------------------------------------...A.AT..G.TGGA
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------...AACGAAAAA------------------------------------.........G...G.
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------..CAACGAAAAA------------------------------------.............G.
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------..G..GGACAAC------------------------------------...A.A.CCC...G.
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------..A..TGACAAC------------------------------------...A.A.CCC...GT
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------..G..GGATAAC------------------------------------.............GT
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------..G..GGATAAC------------------------------------.........G...G.
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------..C..C------------------------------------------..C..G...G.G.TG
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------A..G.C------------------------------------------..T..A...G.A..A
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------..C..G------------------------------------------.....G.........
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------GGTCCA------------------------------------------CAGCGCATGATCACC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------ACAGCT...G.C------------------------------------------..AGAAT.CG...AG
Botryllus-schlosseri_botctg002459g63408_NONE                                            ---------------------GATTCCTCGT..------------------------------------------...A.A.CC...G..
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------..CG.CGAGTCG------------------------------------....AA..CG..G.A
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------..CG.TGAATCG------------------------------------..A.AAG.CG.TG..
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------TCA------..AAAGCG.CA.---
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------------------------CTGGCGCAGATTCCCTGG------GCC.CACAACAG---
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------CTCACCCAACTTCCATGG------GCT.CTCA.CAG---
Acanthaster-planci_oki84-25_NONE                                                        ---------------------CGGAAG.ACTTCGACGACGCGCCG------------------------------G....GGACT...AG
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ---------------------------------------------------CTCGCCGCCATTTCTTCA------TCT.CTT.TTCG---
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------..AGTCGACGTC---------------------------------TGC.GCTA.CCA.C.T.G
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------CTGG.AGAT..AT..---
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ---------------------------------------------------GTCAATACTTTGCATCTT------..A.CG...TCA---
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------------GTCAATACGTTACATCTT------..A.CG...TCA---
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------GTCAATACTCTGCATCTT------..A.CG...TCA---
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------GCCAAC..CTTGGAC------------CCCAACAAAGTAGTGATG---AGTG.AGAA.AACA.TG.
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------AGTGGT..AGG.GGGGCAGGAGGT---TCCATTACCAGTCTGGACGCT------G.AGAAT.C.AG---
Acanthaster-planci_oki169-35_NONE                                                       ---------------------CACGCC..CG..ATGGCG---CCC---TCACTGACGTCACTGAGCAGC------AGCGAGC.C.GG---
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------AACAACGGCTTTGGCTCCAAGAACACTGC.T.CTG.---
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------AATAATGGATTTGGCTCAAAAAATACAGCGT.CTG.---
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------ATTTTTACGATGAGGTGG------A.TTCTT.C.A.---
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------------GTGTACAGTCTCCGCTGG------A.CTC.T.C.GT---
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------GTCTACAGTCTGCGCTGG------A.CTC.T.C.G.---
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------GTATTCAGTCTCCGCTGG------A.CTCTT.C.G.---
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------GTCTTCAGTCTGCGTTGG------A.TTCTT.C.GT---
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------CTCTCAAAGCTTTCCTAC---TGCACCTCGT.TTCG.AA
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------CGACACAATTTGATGTAC------AGTAC.T.CCGA---
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ---------------------------------------------------CTCAGCCGAATTCACATG------AC.AC.T.C.GA---
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------------------------------CTTTCGAAGCTGCCGTAT------TGC.ATT.TCGG---
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------------CTTGCCAAACTGCCATAT------TGTGCAT.C.GG---
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------CTTGCGAAGCTTCCATAC------TGTGCGT.C.GG---
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------------------ATACTCAAGCTGCCGTGG------AGT.AAT.T.GG---
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------ATTCTCAAGCTTCCCTGG------AGC.AGT.C.GG---
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------------------ATCCTGAAGCTGCCGTAC------TCCACGT.TCG.---
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ---------------------------------------------------ATTCTCAAGCTTCCATAT------TCAGCGT.CCGG---
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------------------------ATCCTCAAACTACCGTAT------TCCGCTT.CCGG---

                                                                                        2701
Used4treeSearch                                                                         111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        .CG..TGCG..T..G..A..A.....T..T..C........A..C..A...ACA..CG.A.GT---------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   .CG..TGCG..T..G..A..A..A..T.....A..T...........A...ACT..C......CAG..G......G.TA.T.........
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 TC....A.......C.....G........C..A..T..C..C.........ACC..T.....CCAA..G..G..AG.C.....C..T..C
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   TC....A.T.....C.....A........C..A..T..C..C..C......ACA..T.....CCAGT.G..G..CG.C.....C..T...
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            .C...TA....T..C.....G..A...T.T.GC.....G..C..C..A..TACT..CG.A...CAA..G.....CG.C........G...
Acanthaster-planci_oki20-22_NONE                                                        .CA...A.............A..........GA.....A..C..C.....TACT..C.....TCAG..C..G..AG.CC....C.....C
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            .CA...A....T.....A..T......T.C..C..C.....C..C......ACA..C..A...CAAT.G..G..CG.CC.T..C......
Ptychodera-flava_PF12118-t1_NONE                                                        .CG..TA.T.....A..A..A......T.T..C..C..A..C..C..A...ACT..C..A..TCAA........CG.TC.T.........
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             .T.TTTACT....AA..A...........T..C........C..C.....T.CC.....T..TCAG..G......G.TA.T..C..C...
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              .CGTTTATT.....C..A..G...........A..T..A..C.....A...ACC..T..T..TCAG..C......G.TC.......T...
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  .CTTTTAC....T.A..A..G..A.....T..A........C..C..A...ACC..T..T..TCAA..A..G...G.TC.T..C..C...
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              .C.TT.AC......C.....G........C.....C..C..C..C......ACC..T.....GCAG..G.....CG.CC....C..C..C
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             .CGTT.ACT...........T........C..C..C..C..C..C......AC...T..T...CAA..G.....AG.TC....C..T...
Acanthaster-planci_oki58-6_NONE                                                         C..TT.GAG...AGG.....GTC......T..T.....A..C.....C.G....C.......CCAGT.G..G..CC..A....C..G..C
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             .C.T.TCCA..T..G..A..G.....T..C........G..G........T......G.G...T.G..G..G..C.....T.........
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ...TT.A.T..T..G.....T.....T.....A..C..C..C........T........T..C..C..G.....C...C....C..T...
Acanthaster-planci_oki15-190_NONE                                                       ...TT.A.T..T..C.....G........C..C..C..G..C..C........A..T..T..GCAG..C..G..A....T...C..G...
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ..TT...C....A.A.......GC.....T..C..C..A..A..C........A..C..A...CAG..C..G..C........C..C...
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            .C...TACT...AAA..C....GT.....T..C..T..C..C...........A.....T..T..A..C..G..A..AC.......G...
Ptychodera-flava_PF18670-t1_NONE                                                        .CG...ACT...AAA..A..A.GA..T..T..C..C..G..C..C........A........T..A..G..G..C..AC.T..C..T..C
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    .CA...ACG...G.C.....A........C..T..C.....C..C............C.G..T.....G..G..C...C....C..G..C
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   .C....ACA...G.C.....A........C..T..C.....C..C........A...C.G......T.G..G..C...C....C..G..C
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    .CA...AC......G.....A...........A..T.....G..C..A..T..A..............G..G..C........C..T..C
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   .CG...AC......G.....A...........A..T..G..G..C.....T..A..............G..G..C.....T..C..T..C
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  .A.TGT.C............T...........T........C.....A..T........A........C.....C.....T.....C...
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             .A.TG..C.........A..............C........C........T........A..G.....C.....C...........T...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            .....T.C......C..............C..T.....G..G..C.....................T.A........A.....C......
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             AGCCACTGCTTCCCTGAGACCCAGTTCATAGCGGTGACTGCTTATCAGAACGAGGAGATCACAGCTCTTAAAATTAAGTACAATCCATTT
Oikopleura-dioica_GSOIDT00000279001_NONE                                                .C...GCCA.....AAT...G.GA.....T..T..C..C.......................CT.GT.G.....CCGCC....C..T...
Botryllus-schlosseri_botctg002459g63408_NONE                                            .CGTT..CG..T........GA.A..T..C..T..A..A..G.....A..T..A...G.T------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               .CT....CG...A.G..A...AGA.....T..T..C........C........A..TG.G..GT..T.A.....C..A.....C..G...
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            TCG..T.CA..T.AG.....AAG......T..T..T........C..A.....A..TG.T..TT.G..C..G..A..A..T.....T..C
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            .CTTTT.CT..TGAA.....TG.A..T..T..A..T..A........A..TC.TCG...A...AG...G.....CG.A.CA.........
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             GC.TTTGTG...G.C.....GG.....G.G..C.....A..C..C........TCGC.....CAAG..G..G..CG.CA.......G...
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             GCGTT.GTT.....G.....GG.....G....T..C..A..C...........TCGC.....CAAAT.G..G..CG.TA.......G..C
Acanthaster-planci_oki84-25_NONE                                                        .CGTT.AT.....AA.....G.......CG..C...........C......C.TCG...A..TCAG..G......GC.AG...C.....C
Oikopleura-dioica_GSOIDT00006159001_NONE                                                .CATT.GA...T.AAA.C..TTCC..T..C..C..T..A........A...A.T.CAG.T...AAA........CGC.C.......T...
Oikopleura-dioica_GSOIDT00014261001_NONE                                                .CGTT.ACA....GC...G.G..A......A.C..C..G..G..C.....TC...CA.....GAAG..C..G..C..CAGA........C
Botryllus-schlosseri_botctg005874g48703_NONE                                            TC.TT.A.T..TGTG..A..AA.C.....TA.C.....C..G.....A..TAGCC..C..T.TCAA..G......GCTAC......T.AC
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            .CTTT.GCT..T..AC.A..TGCT...G.CA.A..T..A..C..C..A....GAC.......TAAA..G..G..CGCAA.......G...
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               .CTTT.GCT.....AC.A..TGT...T...A.A..T..C............TCTC..G.G...AAG.....G..A..CA...........
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            .CTTT.GCT..T..AC.A..TGTT...G.TA.A..C..A..C..C..A....GAC..G.A...AAA..C.....C..CA...........
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   .C.T..ACA..T..A..A..A..A..T..G..A.....G........A..TC..TT...A...AAG..G.....CG..A.A..C..T...
Pinctada-fucata_pfu26-120078t1_NONE                                                     .CATTTATA..T..G..AT.AGTA.....T..C..C..A..A..C.....TC.ACTT..A...AAG.....G...G.CAGT.........
Acanthaster-planci_oki169-35_NONE                                                       ...T.TGAG..TG.C.....GGCC..T.C......C..C..C..C......C..CT......TCGA..G..G...G.CAG......C..C
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    .C...TGT......C.....TGCC.....C..T..T..CT.C..C..A...C.CA.......TCAG..G..G...G..A....C..C..C
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             .CT...GT...T........TGC...T.....A......T.C..C......C.CA.......GCAAT.A..G...G..A.T.....C...
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              .CGT..GCG...GAA.....TGTC.....C..A..C..G..A..C..A.....AC.......CCAGT.G......G.CA....C......
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    .C.TT.GC......C......AGC.....C..C..C..G...............A........CAA..G..G..CG.CA..........C
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   .CGTT.GC......A......AGC.....C..T..T..A..C..C.........A....A..TCAGT.G..G..CG.CA....C.....C
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            .CTT..GCT..T.AA..A........T..C..A..C..A..C..C..A..T..AA....T..GCAG........CG.CA.T..C..G...
Ptychodera-flava_PF18712-t1_NONE                                                        .CAT..GCT..T.AA..A........T..C..C..C..C..A.....A..T..AA.......CCAA..C..G...G.CA.T........C
Oikopleura-dioica_GSOIDT00004289001_NONE                                                .CTTT.GT......C..A.TGAGC.....C..C..C.....G..C..A......CGC.....GCAG..C..G..CG.CC....C..C..C
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 .CTTTTGTG....G.......G.A.....C..T..T..G........A......A..G.G..G.AG..G.....CG.AA.......G...
Oikopleura-dioica_GSOIDT00007455001_NONE                                                .CGT..ATT...AAG.....A..A.....T..T..C........C..A..T..AA....T..GCAA..A..G..CG.CC.T..C..T...
Botryllus-schlosseri_botctg007226g53212_NONE                                            .CAT..GTA...AAG..A.TG........C..C.....A..C..C..A..T..AA.......GCAAT.G.....CG.CC.......G..C
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               .CAT.TGT....AAA....TG........C..T.....A..C..C.....T...A....A..TCAA..C......G.CC.......G...
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            .CGT..GTG...AAG....TG........C..A.....A..A..C.........A....T..CCAG..G.....CG.CC....C..C..C
Ptychodera-flava_PF10086-t1_NONE                                                        .CGT..GTG...AAG.....AG.A.....C..T..A..A..G..C..A.....AA....A..TCAG..G.....CG.CC.......G...
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            .C.TT.GT....GTC.....GGTC.....C.GT..C..C..C..C........AA.......CCAA..A..G..CG.C...........C
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 .CGT..GT....AAG......G.......C..C..C..A..A.....A..T...A....A..TCAAT.G.....CG.TA.......G...
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              .CGT..GT...TAAA..A..GG.A.....C..A..C........C.........A....T...CAG..G..G...G.CA.......T..C
Pinctada-fucata_pfu930-101250t1_NONE                                                    .CTT..GTG...AAA.....AG.A........A..A..G........A..T..AA....T...CAAT.A..G...G.CA.......G..C

                                                                                        2791
Used4treeSearch                                                                         111111111111111111111111000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   .......GA..T.GA...AATT.T..TGGT---C.CA..ATA---GATAACAGTACGCCTCCCAACCAG---GGTTACATTCCTTTTCCA
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 .......GA...AGG..CAACT.C..TGGGCCC.CAA.CAT.---CGG------------CCAAAT------GGTTATGACGGCAGACCT
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ..C....GA...AGA..CAACT.C..TGGCCCT.CAA.CAT.---CGA------------CCGAAC------GGTTTTGACGGCAGATCT
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            .......GC...AGA...AACT.C..CAACTTGTCACCA.GA------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        .......GG....GA...AATT.T..CAGCTTTGC.ACCAGA---------------------------------------GAGCGTCTA
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ..T....GA....GG..CAACT.T..TTGTTTC.ACAGGAG.------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ..C....GA....G...CAACT.T..CAGTTTT.ACAGAAC.------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ..C....GA....GG..GAACTTT..GTCC.TGTACACATCT------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              .....G.GC...AGA..CAACT.T..CTCC.TGTACACAGCT------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  .......GC...AGA..CAACT.T..TTCC.TGTACACCGCT------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ..C....GC....GG..CAACT.C..CACG.TCTACACGGG.------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             .......GA..T.GG...AATT.T..CACG.TCTACACCGG.------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ..C.....G....G......TG.C.TCACCGCG.TCTTG..A------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ..C..G..C..T..G.....C..A..G---C..CCG...ACA------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ..C.....C...T.A.....C......---..GCC...CGG.------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ........C........CATC..A...---.AGG.C..G..T------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ..............G...ATC..A..CAAT....AC..CGGA------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ..T.....C.....A..C..C..A...---..GT.....AG.------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ..C.........T.G.....T..A...---..GTA....GG.------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ..C..G..A..T..G..C..C......---..G.A...CACA------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ..C.....C........C..T..A...---C...A...CAC.------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ..C..G......T.G..C.....A...---.........GGA------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ..C..G......T.G..C.....A...---.........GGG------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ..C.....C.....G........A...---....ACC...C.------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ..C.....C...T.G.....C......---....A.C.C.TA------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ..G..G..A..T.....C.........---....A.......------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             GCAAAAGCTTTCCTTGATGCAAAGGAA---AGAAGTGATCAC------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ..C..G..G..T..C.....TG..C.G---C.C.AAC.GA..------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ........A..TT.G............AGCC...CA..GACT------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ..C...........C..C........G---C.CTCA.GGAGT------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            .......G...T.GA---------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ..C..G.GC....GC..AA.GGGAC..TCGC.CT.CA.A.G.---------------------------------------AAGATGTCT
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ..T..G.G.....GC..GT.GGGTC..TCCC.CT.CA.AAGG---------------------------------------AAGCTGAAC
Acanthaster-planci_oki84-25_NONE                                                        ..G..G.GA...AGG..ATGCG.CCCG---------------------------------------------GACGATTGTATTCGGGCA
Oikopleura-dioica_GSOIDT00006159001_NONE                                                .......G...T.GC..GCG.GCACC.GCT.AG------------------------------------------------AAACGCGTT
Oikopleura-dioica_GSOIDT00014261001_NONE                                                .......GA...AGAA.CAATGGA------....AC.CGA.A------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            T.G....GC.....CCCC.GTGG.AC.AGA..G..G.T.A.G------------------------------------CAGAGCAGAAAA
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ...CG..G.....G...A.ACGGT---GCT.A..CAA.G---------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ..G....GA..T.G....AACGGC---GGA....CGA.CA.A------------------AATAAA------------------AAGCCG
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ..G....G...T.G...CAACGGT---GGA..GTCGA.CA.A------------------ACGAAC------------------CGATCA
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   .....G.GG..TAGG...C.T.CA.G.------------------AGG------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     .....G.GA....GC...T.T.CA------------------------------------------------------------AGACTT
Acanthaster-planci_oki169-35_NONE                                                       ..C....GC...AGA...T..TCC------------------------------------------------------------AGATTA
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    .......G.....GC.GCAGCG.T..CATGGAGCTCC.CAGG---ATGTCCAGGATGCAGAGTAAAGAGTACCCAGTTGTTCCCAGGAGC
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ..C....GA..T.GG.GCAGTG.T..CATGGAGCTGC.CAGA---ATGTCAAGAATGCAAAGTAAAGAATATCCCGTGGTCCCCAGGAGC
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ..T....GC..T.GC..CAACGGCATGGGA.....A.....T---CGCTTGAGCATG------------------------AAGCGTCCT
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ..C..G.GA....G...CAATGGA---GGA.ACC.A---AGGGAGCGAGCCATCCTGGGTACCAAG------------------CGGAGC
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ..C..G.GA....G...CAACGGC---GGC.ACC.AAGCAGGGAGCGCGCCATCGTGAGCACCAAG------------------CGGAGC
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ..T..G.GA..T.GG...AATGG.TT.TCTC.C..GTTAG.T---CGTGGTATT---------------------------AAAAGATCT
Ptychodera-flava_PF18712-t1_NONE                                                        ..G..G.GA..T.GA..CAACGGCTT.TCCC....GTTGG.T---CGTGGAATC---------------------------AAGCGACCT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ..G....G...T.GC...AATGGTC.CGCC....AG..CA.G---------------------------------------AAGCGATCG
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ..C....GA..T.GG.....TGGA.CCGGG.AGC....GA.A---AAGCGACAACTTCACAGAATG------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ..G....G...T.GC.....CGGC.CTGGA.A.C....AA.G---AGGTGA---------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ..G....GC..TAGG..CT.GGGAAGTGGC.A.C.A..AA.AAGAAGACAGCATTTTCATTTGGAT------------------CGACCA
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ..G..G.GA...AGG...T.TGGCAGCGGG.A.C.A..AA.AAGAAGACAGCACTTCCACCTGCAG------------------CAGCAG
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            .....G.GA..T.GA..CT..GG.AGCGGA.A.C....AA.A---AGACAACACTTCCACTTGCAA------------------CAGCAA
Ptychodera-flava_PF10086-t1_NONE                                                        ..T..G.GA...AGA..CAATGG..CTGGC.AGC.G..GA.A---AGAAAGCTA------------------------------CAGTCA
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ..T....G....AGA...A..GG..C.GGG.AG..A..GA.A---AGGAAATACATTGGCGCGACG------------------GGCACA
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ..G..G.GC..T.G....A.TGGT.CCGGC.AGC.G..AA.G---AAGCAGGCACTGATGTCGAAC------------------CGAGGG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              .......GA..TAGA...T.TGG.AGTGGA.A...G..AA.A---AAAAGACTTCTAATGAGCTCAATT------------CACCAATCC
Pinctada-fucata_pfu930-101250t1_NONE                                                    .......GC...AGG...T.CGG.AGCGGA.A.C.A..GA.A---AAAAGACTGTTATTGAGTTCTAGT------------CAGCAATCA

                                                                                        2881
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   TCTTAC------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 GCAAGTATAGAG------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   GCAGGTATGGAG------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------------------------------------GACATTAGTATTCTGTCGAAT
Acanthaster-planci_oki20-22_NONE                                                        TCTTAC------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------GTT------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------TCA------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------TCA------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------------TGC------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------------TGT------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             TCATCGCCAACGGGCGAGGATCAAGATCAGTCGCCGTCACTATCCCATTCT---------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             AGCAGC------------------------------------GGAAACTCG---------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        TCGTCT------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                TCCAGC------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            CACGAA------------------------------------------------------GAGTGC------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               TCATCG------------------------------GACAACCAGCCGGAC------------------------ACCACCTATGAA---
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            TCATCGGGCAGAGGATCGATTGGTTTAGTACAACCGAGCAATGAGGAAGAA------------------------AATACAAAAGAACCT
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ACAGAA------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       TCCGAT------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ACAGTG---------------------------------------------------------------AGACAGAAAGTGTCCTCG---
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ACCGTG---------------------------------------------------------------AGGCAAAAAGTGGCCTCC---
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              GCAGGG---------------------------------------------------------------GAAGACAGTATCTCTGAGATT
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    GCGGAAGCAGCGGGAGACCGCAGTGACTCAGGAGTCAGCAACAAGCGGCCG------------------------TGTAACGGAGGG---
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   GCGGACGCAGCAGGGGAGCCGGGTGACTCA---GTTAGCAACAAGCGGCCG------------------------TGTACCGGAGAA---
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            TCTAGC---------------------------------------------------------------------TGCTTGGAAACT---
Ptychodera-flava_PF18712-t1_NONE                                                        AGCGGC---------------------------------------------------------------------TGTATCGAAACG---
Oikopleura-dioica_GSOIDT00004289001_NONE                                                GCGTCA---------------------------------------------------------------ATCAAGTGCGCGCAGCAC---
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ATGATGGGAAAAAGGCTTTCGGATGATTCTAGC------------------------------------------AAGATAGCTAGC---
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TTAGTTGGAAGTCACAAGGAAACCTCAAGCAACCCACACCGGCAC---------------------------------CTATACTCA---
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ATGGTTGGCAACCACAAGGAGGCAGCAAGCAACCCAACTCGTCAAACAAGT---------------------------GTGTACTCC---
Ptychodera-flava_PF10086-t1_NONE                                                        GCTAATTTAGAGGCCTCGGAGCACCGAACGCAACCCGAACTGTCGAACAGC------------------------TGCACTAGTCAA---
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TACGAAATCGACCACGGTGATGAC------------------------------------------------------ATCCCAAGC---
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 TCCGAT------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              AGTACA---GCCTATACAGACGAGGGGTCCCGAGTAGACGATCCCCAAAGTGACGAAGATGAC------GAAATCTGTGTGGACGAA---
Pinctada-fucata_pfu930-101250t1_NONE                                                    TCGTCTGAGACGCACGCAGACGACGCCTCACATGCAGACGACACTCACAGTGACGACGACGATGACGCAGAGATATGCGTCGACGAA---

                                                                                        2971
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GCT---------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ---------------------GTGGCTAGCC.CCA...AC.G.GTAACCGA.TGAAG.CTGGCT.GAC..CTAG.GCCA.C.TC------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------ATGG.GCGCT.T.C.CCCTCG..GAC..CTTTA---------GGGTCACGAAG.A.TC.CACT------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------ATTG.CCGTT.C.C.CCATCT..GACCCC..CTCCTGTA..TAGCA.TC.T.A.A.CG..TCATCT---
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ---------------------GGTGC.TTC...C.CTCT......AAC..ACTA------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------------.T.T.T..ACACG.TA....C.AC..C------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------CGG..CT.AGGA..T..TGGACT.....A.---..A..GAGGTC.CT...A..T.T..CAA.CACG
Acanthaster-planci_oki15-190_NONE                                                       ------------------------G.T------C.C..C...TG.CAC..TCA.---.....G..GA.A...C.A...CTT..CA.T---
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------C.T..TC.CT.C..T..TGTGCAC..TTT.---...GGTT.AAA...TC.A....TT..A..C---
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------.G...CC.AT.T.CC..GG..CAT.TGCATGACAT...G.AACA..G...A..GCTT..T..A---
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------CGT..CTAC..ATCT...G..CAT.CTCA.GATGTA....AACA..GT..T....TG..T..A---
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------..GAGTGGACAT..C..C.TGACC...------.....G..ACA..TT..A...CTC..A..C---
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------..GAGTGGACAT..C..CTTGACT...------.....G...CA..TT..A...CTC..A..C---
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------..G..CGGAT.A..A..CTTGCA...T---------.....ACAA..T......CTC..A..C---
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------..G..CGGA.....A..TTTGCA...T---------.....ACAA..T..T...CTC..A..C---
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------..G..TGCACCA..A.C.G..TCT..AG.T---..A..TATGACA.....T..C------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------.G...CG.ACC.....CTAT.TCT..G...---.....TGTGACC..T..T..C.TG..A..C---
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------.....C............G.G.......A.---.....GT....A.....G..G.T...TA.T---
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------AAAGAGATGATGGAGGAACCCGGAGACAGC---CAGCAACCTGGGTACTCCCAATCAGGGGGG---
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------G.C---------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------G..ACTTACTACA.A..TA.G.C.A..GCGGGGACATCG.AAACA..TG.AAG.GT.A.TA.C---
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------G..A.TTATT.TA.A..TT.AACGA.AGCGGGTTC.TCG.AAAAT..T..GAG.G.GAACACA---
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------C..TCCCAATCC..GT.T.ACATGTCGCCAAC.A..GGA..CGGTGAGAC.G.C..A------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------AC.C..GA.TC...GGAT.AT------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------GTGC.CA.TGCTTAC..AC..AGT.....GCCTGTT.CAGGTT.GTACGCAG.T..CGT..CA------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------AGAAACCT.G.TAAATC.TC.AGA.A.AGTGGTGC.AA..ATAATGAA
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------C.TTCTGAA..AACCAGAAATTCTCAAACT.GAA.G.GCAAAGCGAA.A.G.TG.A.TATGCA
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------T.TGA.AGC---------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------T.TGAAAGA..G.GA.TG..G.CG------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------A.TCAC.GCCCCTTCAG...T..G.C.AGGGTC.TTT.CACC.C....A.CCTG..CTCCCAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------A.CCAC.GTCCTTTCAG.A.C..GTCTCGAGCT.TCT.CACC.CA...A.T.TG...TCCCAA
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              GGCAAAGATAATTTTGCCAAGAAG.T.A.A...GAA..C...GGACAT..G..GAAAATATC.AGCA..ATTAAATCTGAG.AC------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------GAA.CC..G.GG---A....GCCC.C.AGC.GG.AC.G.AG.GTCGTC....A.GAG
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------CAAACC..G.GGAACA....ACCT.C.AGCTGC.AC.G.AG.GGCGTC....A.GAG
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------T.CGAT---...T.AACT..TGC.AACA..A.GGT.A.TAG.AGTAC.G.C..A------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------T.TGACC.T...AATCCT..TTCTAACA..A..GTGA.CAG.AG.AC.G.T..A------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------.ATTCCA..AAGATCA.ACTTGACAGTTCTT.ATC.ACAAATG.CGAG.AT.CAGAA
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------.AT.GA..TG.AACTC.A..TCCA.CCGG.AAAACCGCT..A.T.------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------------GAT.G.TTGAG..AT...T.TCAGGT..C.AGATCCG.TA.GAG.CG.TTTTCCGCT
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------.ATTCC..T.GAAC...TT.TAATGTTTCTA...ATG..GA.AC.------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------.ACTCT....GATC...GT..AACGT.TCCA.C.ATG..GA.AC.------------
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------.GCA....GG...A.C.G.CTGAGGT.TCGA.ATC..C.A.GA..------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------GACC....GG...AGAC.GC.GAGGTCAGCA.CACCAGTAA.G.TAG.CAC.AAGAA
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------TC...CA.GTTGAATCCG.CGCATGT.AGCAGCTC.CGGG.A.CGCTCCAC------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ---------------------------------.CT..T..CGT.AC...GGA.ACAGTCTCCAT.CTT.CTCGATTG------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------.CT..T..CG.AATG..A.CACCGATT.C.AT.TCTACTCAG.TT------------

                                                                                        3061
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------GGACAACATCCTTATCAGAAT..CCAT---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------------..GGGAATGCACCCTTCCTTGGGT.CCC..CT.
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------------..GGGCATGCATCCATCGTTAGGC...C..CT.
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------------------------..C---------------------C..T.T.AG
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------------------..A------------------TCC.AT..ATCA
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------------------------------------------..GCAG.CG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------------------------.AC......
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------------------------.A..ATGA.
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------------------------.A..ATGA.
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------------------------------.AC.TGGA.
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------------------------------.AC.TGGA.
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------CACTTT---------------------..A---------------TCGATGTCCT.TG.A
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------.....CA..CCA..GCCCACACATTATACGGCTGCG.CGG..GC.
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------...TACA.CCCG..C---------------------..GGGTCA.
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------...T.CT.A---..G---------------------A.TG.GG.G
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------...T....G---..C---------------------..CT.TG.A
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------...T....C---...---------------------..T..G..T
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------...T..T.G---.AA---------------------..GG.....
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------...T.C..G---..C---------------------..T..GG.T
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------...T.C..G---..C---------------------..T..AG..
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------...T.C..G---..C---------------------..T..AG.T
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------...T.C..G---..G---------------------..T..AG..
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------...A.CT..---T.C---------------------AATC.AGAT
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------......A..---..C---------------------..G..TG.G
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------TGGCTTCTT---CCT---------------------GGAACCAGC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------..C---..A------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------...------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------...------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------------------GAGTGT.A.GTTCAG
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------------------------------------------------------.....ATCG
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------GG.TC.
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------G.T...G.C---------AACACACACCAAGGCTCAA.T.TT.TT
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------CAATTG------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------....GAGAA---------AGAATGGGCAAGCAAGGT..CG.A.CG
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               GGTTCTGACCAACATAATTCGAAACAT---------------------------------------TTGAAATTAGACAGC.AC..TTTT
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ATCGAGTCCGAACATAAATTAATGCAC---------------------------------------TACTCGTATCAGAGT.A.T...A.
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------------------------GCCTTG.A..AACAA
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------..A---------ATACAAGAACACACGTAT.CGCG.TCG
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    TACCAGTGTGAGAACGGGGTGTCAAGC------------------------------------------------------ACCT..CAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             TACCAGTGTGAGAATGGTGTTTCCGGC------------------------------------------------------CCCT..CAG
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------------------------------.AG.A.GA.
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    AGCGAGGTGCCCAGAGGACCGTCCCAG---------------------------------------TACAACCCGCCTGCCCAGT..GA.
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   AGCGACGTGCCCCGAGGACCGGCCCAG---------------------------------------TACAACCCGCCCGCCCAGG..GA.
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------------------------------------.AGGGT.A.
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------------------------------------.A...A.C.
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------GAAA..G.C---------GTCGACGTCGAAAACGTG.A.GA.TCT
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------CCCACACATTCACCACATCCA------------------------------------------------------TC.GAATC.
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            TCTCCAGAATCGCGACACACGCATTCT---------------------------------------CAATCCCAAGACGCCA....A.A.
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------AGAGCAAACAACAGTGGTAGC------------------------------------------------------A.T..TTCA
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------CGCCCAAACAACAGTGGCGGA------------------------------------------------------A.T..GTCA
Ptychodera-flava_PF10086-t1_NONE                                                        ------------CAAAATGCCCAAGAA------------------------------------------------------ACCGA.GA.
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            AGAGAACGAGGTCATTCGTCACATGAG---------------------------------------CTAGCGAGGCTCGCCA.CGAGG..
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------CTGGGCCACGCCGGCCGTCCGCCTCATCTGCATCCCCATGCCGCC..G---------CTTGATAATCAGCAGGAC.ACGA.GA.
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------CATTCAGGTAAAAAA---------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------CAATCTGATTCCAAAGATACTGTGAAAACAGAAGCAGC.GAA---------GTCCCCGCTAAAGAATCAACCGAT.CA

                                                                                        3151
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------ATCCAGG..---------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------TACGGCTCTCAGG.C..CATG.TA---AG.GC.AATCAA.G.A..---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 C....CATG..G..C------------------------ATCTACCCCGTAGGCCCG..AATC...---AC.CACA.CC.C.GTA..C.T
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   C.....ATG..G..C------------------------ATCTACCCAGTGGGCCCG..AATG..C---GCTCACAACC.C.GTA..CAT
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            .A.G.AACGGTCAGCAGGAATTCCTGC------------------------CCTGCA..GGTAGTG------------------------
Acanthaster-planci_oki20-22_NONE                                                        GG.T...CA.GTT.GCA.------------------------------------..C..AGTC.AATTCGC.GACA.TC..CATGAACGG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------G....GTACC..------------------------GTCGGCCCGGCTCTC..GATAGGG---TCT.CATTCAACT.GA.ACA.
Ptychodera-flava_PF12118-t1_NONE                                                        CG..A..CA..TTACC..------------------------GTCGGGATGCCA.TA..A---G..---GCCAC.TTCAAC...A.GCAG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------ATC..CT.CC.G---------------------------------CCTGGA..CA.CTG.---..A..CCTT..G.GAGATCA.
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              .GAT.AAC....T..C.CACG------------------------------GATTC....AGAT.CCAC...A...TCCC..GTGC.CGA
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  .GGT.AAC....T..C.CACG------------------------------GATTC....AGAT.CCAT...A...TCCC..GAGGTCGG
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              CGG...ACG..TT.CC.CAAC------------------------------GACTCG..C.GCT.G---...A.C.TGCCC.GGGC.CG.
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             CG....ACC..CT.GC.CAAC------------------------------GACTCG..G.GCT.G---...A.C.TGCCC.GGGC.CG.
Acanthaster-planci_oki58-6_NONE                                                         GGT...ATG...T.AATGCATCCGGGATGCCAC------------------ACACT...AATGGACTGG...AC.AC.TCCT.T.CT.GT
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             GTGGCAGC...T...C.GTTGTCCATTGCCCAGAGTCACGGCCTGGTGGCCTCGTG...CAGCGT.---TCC.CG.CC.AAT..G.GGGT
Crassostrea-gigas_EKC28765_Brachyury-protein                                            G.TT..GT...T...------------------------------------------..CGCC.AC---.....CCCTAAC.....GAA.
Acanthaster-planci_oki15-190_NONE                                                       ..A..T........G---------------------------------------.GC..A..C.AC---..A..CCCGCCGT.A..TGGT
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            G.GT.CG.A..C------------------------------------------TCA..C...------.....C.CCCCGT.TA..GGG
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            G.GT.A.....CG..C..------------------------------------G.C..CAGA------.....CA.C---AGTA.AGGT
Ptychodera-flava_PF18670-t1_NONE                                                        C.T..C..C..TG.AC.C------------------------------------G.C..AAGA------.....CA.C---..T..TGGG
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    C..A.C..C..G..GC.C------------------------------------..C.....C------.....C.CCCCGT.....GG.
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   C..A.C..C..G..GC.C------------------------------------..C.....C------.....C.CCCCGT.....GG.
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    C..A.C..C..G..GC.C------------------------------------..C.....C------.....C.CCCCGT.....GG.
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   C..A.C..C..G..GC.C------------------------------------..C.....C------.....C.CCCCGT.....GG.
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             GGAG....CA..G.A.G.------------------------------------..CT.CA..TAC---....A..CC.C.C.T..GC.T
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            G.T.....C........C------------------------------------........CT..---..........CAC....G..T
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ACCCTGTGTCCACCTGCA------------------------------------AATCCTCATCCT---CAGTTTGGAGGTGCCCTCTCC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------ATC---------------------------TCCA.CAG.G.A---A.T.ACA.TAACT.GAATGGT
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------.CA..CGG.ATC---A.CCAA.CCAA..GTGA.AA.
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------.CGG.A---------A.TCAAA.CAAC---------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            GGAA.TGAAATGAA.AGTGTT---------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             T.GA.CG.C---------------------GATTCGGAT---------------GG...G..AATC---A..CGCCTGA.A---------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             .GTG..A.C---------------------AGCTGCGAT---------------TC...G..GG.G---A..CGCCAGC.C---------
Acanthaster-planci_oki84-25_NONE                                                        GAGA.ACT...C.ACAGCAAT---------------------------------GGC..AAGGA.A------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------.GC....CAA.G---..AAAAA..------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                G.ATCT.C...G.A.C.T------------------------------------CCA..A.C...A------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------------------GACTTG..AGGC..C---A.AAGAA.TC.CA..GAA.GT
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               .ATT.CACAATGTA.C.CAACATTGAC---------------------------GTC..CA.AAGC---GTTG.CA.CCAA---------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ..A---------------AACAAAACA---------------------------GT...GTTGGA.------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------TCG..GG..GAA------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     GGAA..CT...G.A.---------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       C.AA.CA.G....A..AGGGC---------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    GA....CTG..G..CA.CAAC------------------------------CCCT.C..GATCT.C---...GAGCACA.CCAG------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             GA...CCTG..T..AC.CAAC------------------------------CCAT.C..A.TG..C---...GAGCATA.CCAA------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              T.TA.TCC...C------------------------------------------.CC..AG.GT..---..TCA..CC.AC.GA------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    GA...CAAC..GTGC.GCAAC------------------------------------....TCA.C---ATCG.CACC.AC---------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   GA...CAAC..GTGC.GCAAC------------------------------------..C.TCA.C---ATCG.CACC.AC---------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            .A.G.T.TC---------------------------------ATGACCTCGACA---------AAA---A.AGAA.ACAAA.AT------
Ptychodera-flava_PF18712-t1_NONE                                                        ..AGCA.TC---------------------------------CTTACACCCCCAGGC..CGGAAAG---A..GAA.AGAAA.AG------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                G.GA.TGAA---------------------ATC---------------------CGA..AGC.GAA---AC.A.A.A.AAACA.------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 .ATTCAGAA------.ATGAT---------------------------------G.G..AACATTG---A..AAAT.TAAA---------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ..GAGAAAGATTAGC.GCGAGCAAAAG---------------CAACCCCTACCGTTA..GGGCG.C---GTTCAAACTCAG.AAG.A---
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               T.GA.TACG---------------------------------------------TCA..AAT..GA---ACCGAAAA.C.G---------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            T..G..ACG---------------------------------------------TCA..AACCAGG---.TCGAGAAGC.A---------
Ptychodera-flava_PF10086-t1_NONE                                                        .G.G.TA.A---------------------------------------------CTG..A.C.GTG---GTC------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            CG....AAC---------------------------------------------GGA...GGC.TG---A.CAAGT.TAAA---------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 .AG..CCTG---------GACGTGGTG---------------------------GG...G.CA.AG---AGTCCGCT.CTC---------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    T.TA.TAAA...AA..ATGACGTACCGGAAGTTACTGATCACATGCCTAAGTCATT...G.CGGTA---GT.AAA.TGA....T.AT---

                                                                                        3241
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---..GTAT---------------------GG.G.AACATTAGAGGCAAAGTTCAGCTATCAACGAAATCTTTCAAATACACATGTA---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 .CG..GTACGACATGCGGTCTCACTCGT..GGAGAAA..AGTTCCTCGCCGGACAGCCCGGAGATGCAGACGAAAGACTTGGGGTCGAAA
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ..G..GTACGACATGCGGTCTCACTCAT.CGGAG.AA..AGTTCCTCGCCGGGCAGCCCAGAGATGCAGCCCAAAGACTTGGAGTTGAAA
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        .GA..T------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            AA.GA.CAAGCAACTG.TAAAGAACAA.TC..GCAACAATTCGACAACGATGATTCCAAAGACAAGATAACTGGAGAATTG---------
Ptychodera-flava_PF12118-t1_NONE                                                        AA.GG.ACAGCTACG..A------------..GGCT.CAATGATCGGTGAAGTGACAAAATCGAAG---ACAGGCGACATTGTC------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             TA.T.T---------------CCTCTCCTA.C..A.CAGTATCCT---------GTTCCCAGCCGCTTCTACCCCGACCTT---------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              TA.AG.GTG------CAA---CCGTTCTTC..AGAACAGTTTGTCAACAACCTGCCCCCCACCAGATTTTACAACGGT------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  TA.GG.GTT------CAA---TCCTTCTTC.CGGAGCCCTTTGTCAACACTTTACCTCAAGCCCGCTATTATAATGGC------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              TA.G..ATG------G..GGCTCCTTCCTC..GGA.CAGTTCGTGAGTAACTACGCCAAGTCCCGCTTCCACCCCGGGGCAGGAGCCGGC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             TA.G..ATG------G..GGCTCTTTCCT...GGA.CAGTTCGTGAGCAACTACGCCAAGGCCCGCTTCCACCCGGGCGCGGGCGCGGGC
Acanthaster-planci_oki58-6_NONE                                                         .GAAA.CAG---------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             .CAT.A---------..G---------GGCGG...T..C---------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ...T.G---------...CCCCAC------------...---------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       A.G..T---------...CCG---GTAT.T.....T...GCC------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ..A..G---------...---------CATGCAG.A..C---------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            T.A.ATGGA------AG.---------G.A.CTG.....---------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ..G.A.---------AG.---------G.A.CAG.T..C---------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ..G...---------AGT------------...G.....---------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ..G...---------AG.------------...G.....---------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ..G...---------AGT------------...G.....---------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ..G...---------AG.------------...G.....---------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------..TCCACAGGCTC.C...G....C---------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ..G..T---------G.TCCCCACACCCAC..TG.....---------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ...T..---------C.T---------G.T.........---------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             CTCCCC---------TCC---------ACGCACAGCTGT---------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                .G.AG.GCT------G.T---------------------------------------------CAAAAC---------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ..T..A---------..G---------GT.T.TCA...CGACCCT------------GCAACCCGAAATGATTTCGGGGTAAACCCCATG
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---..A---------A.A---------TTCA.TCAA...------------------------CAGTATGAATCAGGGATTCCCCCATTC
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------GGTG.AATGACTGGAGGA------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------TCA.ATG.CTCAGCCTGCTCCTTATCATCATCGCTGGACGATCAGTCGGTGCCTGGCGCC
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------..GGAT---------------------------TTTGAGCAGGACTCAACG---------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ACG..GATT---------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---..T---------ATG---------CTTGGAGAT.ACAGACTCAACGTATCAGCAGCATCCGAAGCTAATACTGCTCTCCCGTTCTAT
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------CGTCTAAATCCCGCTGCAGTAGTTGGGCCTACAACTGGTTACCCGTTCTAT
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------GG..CACTCAACGGAACGGACGGTAGCGCAAGA---------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------GACATCACGACCGACTTCGCCAAGGAGAGATCCCCGGGTCTACCACACGCC
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------GACATCGCCACTGACTTCGCCAAGGAGAGATCCCCGGGCGTTCCACACGCT
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------TTAGGTTCT.CGTTA---TCGTCCGACAGTACTAGTCGTGGTAACCGCACTCTGCCCATAAAT
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------.TAA...AT.CATTGAACACATCCACGTCATCGGAGTCCAGCAACCAATCTTTGACCATCGAC
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------AATACAAGCTCCTCGAGTAGTTCTTCTTCCAACAGCGCGGAATCGCATCAT
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            TCTGGA---------AAGTCCGGATTCCTATCAGA....TCCTCGAATTCCCCGGAACGCCGGCGTACGCCGGAAGTGACATCATCTAGC
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---GGA---------GTAGAT---------TC.GCG..CGCCGTAGGAGACAATTCAACGAAAATATCGCGAAACTCGATCGCGGACGAC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---G..---------A.GGATTAC------AGTGAGACGATCATTGGTGAGAGCTCATCAAAAAAATCACGAACCTCAATCACGGAAGAC
Ptychodera-flava_PF10086-t1_NONE                                                        ---...---------..ACCTAGA------G.GTA.GTATCGGCGGAGGCGAACTCAACGACACGCACAGAAGAGGAGATT---------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---...------------------------TCGGA.ATGAAGGGGGGACCACATGGAAGTTCGAGCTCCAAAGATGACGTGGAGATG---
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---..G---------CT.AGCCACTCGCT...GCAGATGCACGCCCACCAGCACTCC---------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    .CG..T---------..TAAACACACAGT.G.ACAGATGCTGGCGACGTCACCACCTAAAAAAGACACTGAACCTAAAATCCTCATCCCA

                                                                                        3331
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------TTCCAAAACGGACAG------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 GACACCGCTTCAGACGTGCCT------------------------------GGGTCCACTCAAAACGGACAGACA---------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   GAAACCGCTTCAGACTTGCCA------------------------------GGCTCCGCTCAGAACGGGCAGAGC---------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------AATGCA------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               TTTGCCCCCACGAACTGCCCCTCCCCTTACCAGCCA------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            CATTACCCCATC------------CCAAACCAACCG------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------CCCTATCCACAACATATGTACCACTACCCG
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------TCCTATCCACAAGCGATTCATCATACCCCA
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---TATGGCCTATCCTGT------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------CTAGGCGGGCAGGGTAGCGCTCAGCTCCCG
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------CTCGGCGGACAGGGAAGCGCCGCGCTCCCG
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------ACGTCATCAGAAACCAATGCCATTCCTAGC
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------GCTGGTGACCACAATTCGACGAGCCCTATC
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------CAGCCAGTTGAA
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------------------------------------CGGGACGGGGGTCAAATC---------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------GAGCATTTGAGC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------GATCATATGAGC
Ptychodera-flava_PF10086-t1_NONE                                                        ------------GACGTGGAAAGTAAC---------------GACAAGGAAAACGACACGGCAGCCAATGAACTCAAATCGGAAATTGCC
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------AGGGATGTGAGC
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---GCAGCTCTGGCTGCCTGGTTTAATCACTTGGCTGGCGCTGGAGCCGGAGCCTCCGAACATGCAGCTGCGGCGGCGGCCAATGCCAGT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    TCCGCAAGTTATTCTGTGGAACGCAATCTCACATCTTCAATAGACAATGAATCATCCCAAGGTGTTCCGCGTGTGAAGTCGCCCGTATCA

                                                                                        3421
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------------------------------G.T.AAGAG
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------AACGCCACACCGGAGA.GCA.GTGT.TC.AGCC..AGTGA..AAC..A
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------AACGCTACACCAGAGA.GCA.GCGT..C.AAC....GTTA..AAC..A
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------GCTAACATCGCCATG.GTCA..TT..TG..A...TCTCT..T.A....
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------------GATCCAATT.A..TTGAG.A.T.TCCTCCAA..ACCATT
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------CAGGATGCAAT..A....GAG.A.T.TCCACC.A.TACCGT.
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------..G..AAC.GTCC.G.A..CC.A.GG.TT.CTG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------..G..AAC.GTGC.A.A..CC.A.GG..TCCTT
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------CCGGGACCCGGCGCC...C.CAG.GTGC...AC.CC.A.GGG.T.CT.
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------CCCGGGCCGGGTACG...C.CAG.GTGC.G.AC.CC.A.GGG.T.CTG
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------CTAGACCCCAACATG.C.G.....GGG..ATCTCT.GA.G..GCCCTG
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------------..TC.C...GGC.GATCCCTATCTTCA..CAGT
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------.....ACTGAGC---..C....AT---------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------GTG..G..A...AGC.GT..AC...CT..T..A..G
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------.........GGGGGG......G....TA..A.A
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------..AC.C...AAC.GT..C..ATCT...A.AAG.
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------..G..A...AGCGG.T..C.A..T...A..AG.
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------.....A...AGT..T.......A......C..G
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------.....A...AGC..T.......A......C..G
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------..T..A...AGT..T.......A......C..G
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------.....A...AGC..T.......A......C..G
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------..GC.A..TT..G.A...C.AG.G..T...G.T
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------..GCAC..TT.GGGT..CC.AG.A......CAG
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------..A......T..C.G.......AT.....T..T
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------GACAGGTACCCAACCCTGAGGAGCCACCGGTCC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------A..C..CGAAA.CGT---GCCGAAA.TA.AA.T
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------TACGCGCGG..AC.AAGTAGC.G.---C.ATCG..GA....G
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------AAAACAACAAGA..GC..CG.ATG.G.---C.C.CA..AA.AAG.
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------AGTT.TT..GCCCTGGG.TCTC.A
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------------------------------------GGTA.TGTT
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------CGGAACCAT---------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ACT------------------------------------------------------------GTG.AT..AAAC.CTGTA---------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------------------------------------.CAGCA---------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------ATCTACCACTGCACCA.G..AA.AGATGAGGAAT.TTC.AC.ACCGAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------ATTTACCATTGTACCA.G...A.AGAGGAAGAAT.TTC.AC.ACAGA.
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------CTGGATGGCGACCTAC.GCCCCT..ACC..AA..CCTCG---------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ACGAGAGACCAGGCGAGCCTCGGTAGC---------------TGCCAGGGCGACGACATG..A.G..AG..A.GC.CAGC.TGTGCACAA
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ACGAGAGACCAGGCGGCTCTCGGTAGT---------------TGTCAGGGCGAGGACATG..A.GT.AG..G.GC.CAGC.TGTGCACAA
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            AACAAGAAGATGCAAGTCCCCCACACTGACCGACTG------GTATGTACAACAGCA....ATACGT.T.AAGAAGTCGATG.T.C...T
Ptychodera-flava_PF18712-t1_NONE                                                        AACAAAGACAAGACACAACCGAACGGTGGAAGACTGTCCCATCTGTCCACGCAGTTGTCTCC.ACGG.G.AAGACGATGA.G...CC.G.
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ATCAAGGAAGAGAATTCCTCCAGCGCC---------------TGCGACTCCTCAACA.CTTCT.C.GA.GGAAACTC..T.G.GTCC..T
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------CTCGAAAACAAGAAGAC.CC.CTGATCC..AC..AATT.G..GA.AGG
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ACGGATGAAAAATCCAAGAATGAAGTTTTCAAACAAGAGAGATTACCATCGCCGATCA.A.AAAG...TGAA.CA..C.A...T..AGA.
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            AACGATGAAAAATCGAAGAACGAAGTCTTCAGGCGCGAAACCTTAACATCGCCATTAA.G.AAACT...GAAGCTGCTTC....A.AAGA
Ptychodera-flava_PF10086-t1_NONE                                                        ---GCCGAAAGGGCCCGAGAG---------AGGGAGAGGGGGTTGAGCGCCGCGGAT....CC.CGGACGAAGAA...GA.GTAGAAGAA
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TGTAAGGACCATGAGAGGAGGATGGATGGTAAACACAGA---TTAAGTCAGGATGACAGTTCAAT.GAC.AGAAA.CTGAT...AATGAG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GCGGAGGATGCACTGCGTCGT---------CGCTTGCAG------------GCGGAC------GCGGATGTGGA.C..GATGG.A.CGAT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    GACTGTGATAATGATCGCCGG---------AGGTCAAGG------------------------.CA..TT.T.C.C.CTCAATGG....A

                                                                                        3511
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   AATGTGAAAATG------------------------------------...TACGAC---------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 AATCTACTCCTGACA---------------------ACAACAG.T..G...ACAATC---------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   AACCTACTTCTGACA---------------------ACAACAG....G...ACAGTC---------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GGTCACTATCAG------------------------------CAC..A...CATCACCACGCCCACCATGCC------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------CTG..GGTGAGCCTGCTGCGAGGCTCTGAACTG---------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------A.T..TC.TAATTACGACATGAGTCAAATACAGCAACAAATGAGACTG
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------A.T..AC..AGCTACGATATGAATCAAATACAGCAACAACTACGCGTC
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------..TGG.CAGGCGAAGGATGTGGTT---------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------..C..AC.GCAGAGCGAAGAGGTGGCCAGC------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------......C.ACAGAGCGAAGAGGTGGCCAAC------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------..C..AC.GCAAGCCGAGGACCCGGGGGCC------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------..G..GC.GCAGGCCGAGGACCCGGGCGCG------------------
Acanthaster-planci_oki58-6_NONE                                                         TACTGGCGCGGGGGACACGTCAGGGTTCCCGAATTCTCGGAC..G....GGAGCTTCGATAACGTGGCTGCCTTGCAC------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             GTC---------------------------------------G.....ACT---------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------A....G..T---------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------..C..A...---------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------G.T..G...---------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------G.T..T..T---------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------G.G......---------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------G.G......---------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------G.G......---------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------G.G......---------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------G.T..A...---------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------G.T......---------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------G.C......---------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------TCACCCTAC---------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------CA......TAAG------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------CA.---..T---------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------C.G...C.TCTA------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------..G..AGCTTAC------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------CACCGT...AG.TCCCTACAGATCGTGGGCATC------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------G....G.GGAGT------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------AGG..AC.AAGGAAACAAAATGATGCGCAA------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------------..TC.TTAC------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------------------..AC.TCCT------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------ATGGAA---------------------AGG---..C..AGG.GACATGATGCTCTCCAACTTC------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------CAT......AAGAAGCCC------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------CAT.....TAAGAAGCCC------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------..AGT.AAT------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------GAC..GCG.GAC------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------GAC..GCG.GAC------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------AGT..A------ATTTCAAAATCGAGCACT------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------AGC...A..AGTATCGCGAAATCGAGCACA------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------AGT..T------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------GGG..G.TAAGAGTGTCGCCACGCAGCCCT------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------.....AC.TTCG------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------.....TC.TTCC------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------AACGA.------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------CG.T.AG..TCGCGGAAAAGTGACGGA---------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------..GAGT.G.TCGGAAAGCGTCGGCGGCAGT------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------AGGT.A------------------------------------------

                                                                                        3601
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------------AACGGCTTCAA.TCA..G...CGC..GGTCCCT
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------GCCAGCGGTCAG..GC.CTACTCCAT.GC.
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------------AACAGCAGCGG.CAG..GC.CTACAGCAT.GCA
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------------------------CACTATCAT..ACC...GC.CCAC..G.ATC.A
Acanthaster-planci_oki20-22_NONE                                                        ------------------------TCTCAG---------------------------TTGACAGATT.GCCG..G..C.GAAGCA.CCC.
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            GGGTATGCAGCAGGAGCGCCA---CCTCGTGGTAGGATCGGTGGAAACCAACTTCTATTGGCCACAA.TCAA..T.....ATGCACCGCT
Ptychodera-flava_PF12118-t1_NONE                                                        AACTACAGCCGA---------------------------------TCCAATCTACTGCTCACCACAA.TCAA..A..CATGGCATC..CA
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------CCCCAG---------------GCTTACTGGCTGGGG---------GC....CGG.AC---------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------CCT---CCCCAG---------------CGGTGGTTCGTTACTCCCGTG.AGCAG...AG...CA.CAAACTG
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------CCT---CCCCAG---------------CGGTGGCTTGTCACGCCTGTC.AGCAA..TGGGA.CA.CAAACTA
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------CCCTCGCCGCAG---------------CGCTGGTTCGTCGCC------------...GCCAACA.C..CCT.
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------CCCTCGCCGCAA---------------CGCTGGTTTGTGACG------------..GGCCAACA.C...CTG
Acanthaster-planci_oki58-6_NONE                                                         ------------------CCG---------------------------------------TCTGGTA..CA...TC.C.A.ACAGACTC.
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------------------CGCA...CA..G..CAG..GA.CC.GG
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------CCT..ACCG.....C.AG..GAAAT.T
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------CCA...CCG.....CCAC..GAA.T..
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------..ATCA..G..CCAAA.A.ACTCA
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------..ATCA..T..CCAGA.A.ACTCA
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------..GCA...G..C---..GA.A.G.
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------..GCA...G..C---..GA.A.G.
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------..GCA...G..C---..GA.A.G.
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------..GCA...G..C---..GA.A.G.
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------..ACCTT....CATG..AA.A..T
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------..TTCTG.G..CATG..CA.A...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------....AT.....CA.C...A.A...
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------CCCAGCCCCTATGCTCATCGGAAC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------------CGC..TGTT..TGTC..AA.GTCCG.G
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------------------------AATTATCAT..G..CAG.......G.A
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------------------------------CAT.....CAAA.CATCC.CA
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------..AGCA---TTC.A.TCA
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------------------------------CATTCGCATT.GCAT..G---------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------------TATGGAGCAA.TCAT..AGT.------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------AGCCGGAGT..G...CTCA.A..C...C.A
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------..TCG.T.G.T.TCACCT
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------------CAT..TCAG..AG.GATCACGA.TC.T
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------------------------------------ATGATGAACTCGGCCT.AGCT...ATCT.AA.CATCGGA
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------GCTGCTATA.A...TCCG------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------CTTTTA.A.TA...ACCAC.AATGA.A...
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------...C.C------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------------GGTGGTGCCGTG.TG..GC.CAA.TTC.A.G.A
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------------TACATGGAAA.TTCA..AGCG.AAG.GGATCCT
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------------TACATGGAGA.ATCA...AG..AAG.AGATTC.
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------------------------GGAAGTACGA..G.G..ACTAAAAGCAACA.GT
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------CTGCTCG..TCT...G.CA.CACCGAC---
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------CTTCTCG..TC...AG.CAGCGCCGAC---
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------TCAATCA.GCA...A.TACA.A.AAACCGG
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------TCCATCA..CAT..ACTGCA.A.GAACCG.
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------GCTGTT..TCCA..AAGCC.CGC.GACG..
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------...G.AC.ATCA.AA.CT
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------ACGTTGT.ACCG....CAT.CGT.AC.TCA
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------------------------CCC.T..AA..TCGA.TCA.AGACTC.
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------------------CCCAT..AA..GAGG.TGA.AGATTCT
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------A.GAG.A.AA.C.T.TCT
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------..TAGCT.AAGA.TTTCT
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------ACCGGCGGTGCCTTT..G...ACCT.GACGG.C.GT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------..GG.GAA.TCCA.ATCG

                                                                                        3691
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------GT.CACA.T---------------------------ATT------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------ATGCACA...GGGGG------------ATG..GCCGCAA------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   .TGA.C---------------------------------ATGCA.AG..GAGGA------------ATG..GCCGCGA------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            C.GCGC..TCA.CTACCT------------CTCCCAACA.TCCACC..CG.CCG------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        TCCGGC.ATGGGGTTTGC---------------AGTGAGATGG.CAC.TC.AGCACC---GCCCACAGTT..CCAGAG------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            TCAA..GTTC.AACGTAC---------------------ACAA.CTC.TCAGCC------------AAT.ACTATTCA------------
Ptychodera-flava_PF12118-t1_NONE                                                        TCCA.GTAT..AACCACA---------------------AC.G.CAGTC.GCTA------------AGGT..ACCAGA------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------CACAGC---------------------...GAG.CTG.GTTT------------CG.G.AGTCAGCATGAAGCCTGCA
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              G.CATG------AACTCC---------------------...GAGACGG.GTAC------------..T...AGCACCTTGCTCCCCTAC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  G.CATC------AGTTCC---------------------...GAATCTG.ATAT------------A.TT..AGCACATTGCTCCCATAT
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              G.C.TCG.CG..TCCGCC---------------------..CGACACGGC.ACCGACTTCGCCGGCAACG.GGCCACGCTGCTCTCCTAC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             G.C.TCG.GG..TCGGCC---------------------...GACACGGC.ACGGACTTCGCGGGCAACG.GGCCACGCTGCTCTCTTAC
Acanthaster-planci_oki58-6_NONE                                                         .GCGT.AGGG..ATCAATCGGAGACAGGGACTCTTGCCG...CGATC.C..CCTACCATGGCC---------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             GTCGT.T.CGGATCC---------------------------GGATCA..TGGC------------AGTG.C------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------GCTGGT---------------------.T...CAGAG..------------------------GTC------------
Acanthaster-planci_oki15-190_NONE                                                       TCCC..A...GTGCG------------------------...G..AC.G..GCA------------...G.A------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            TCCG.CG..GGTGCAGGA---------------------..CGG..C.G.AGCT------------..GG..GGTCTC------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            C.AA..G.C.ATAGT------------------------..CG.A.C.G.G---------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        C.A..CG...A.GGG------------------------...C.GTCGG..---------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    TCGC.......GAAC------------------------..CGGCC..G..---------------A.GG..------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   TCAC.......TAAC------------------------..CGGAC..G..---------------A.GG.G------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    TCGC.......GAAC------------------------..CGGCC..G..---------------A.GG..------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   TC.C.......TAAC------------------------..CGGAC..G..---------------A.GG.G------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  C....A..T..AGTGAAT---------------------.T..T...G.G.---------------..CAGC------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             C.......CT.AGTGAAT---------------------.TGATA..A.G.---------------...AGC------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ..C..A.....AGCT------------------------..CA....T...---------------..CT..------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             AATTCTCCAACC---------------------------TATTCTGACAAC---------------TCACCT------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                CCCATCAGTT.TATCGAC---------------------.TCGGC.CTC.A---------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               GCACAC.ATT.AATGCCC---------------------..CCACC.AG..CTT------------...A..CCGATAGACGTGAACGCC
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            .CGCAA---------------------------------AT..A.C.AG.TTTC------------CA.---------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            GT.------------------------------------------------TTT------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        C.GA.A---------------------------AACGAAC.AAA.TCTG.AGCGAAT---------CGTGG.ACAACA------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                GTC.GC------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                TCACAA.ATG.TGTTTCTCACACGCTC------------..CCACTCTCCTGAT------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            C...A.GTGGAAAATTGTGACCGTCATCAATTGCATCAA.T.AAC..AGTATAT------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------------.TCAACT.TC.ATTA------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            TTG------------------------------------.T.AG..GGC.GTCG------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------..CCACTC.TCTGCT------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------TGG------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       TGCA..GACG.TGGAAAAGGCCTCTTA---------TCC.T.G....AC.GTTC------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    TTC------------------------------------..CAGGTC..GTTAC------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             TTC------------------------------------..CCGCTCT.G.TAT------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------..C---C.GC.GTAT------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------...CACC.GC.GTAC------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            C..------------------------------------.T.GGAA.TC.ACTG------------A.GT.A------------------
Ptychodera-flava_PF18712-t1_NONE                                                        C..------------------------------------.T.GGAA..CCGATG------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------------------------------------------------T.A------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        3781
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------AACAACAA.CA.C.TCAAA.CG.GGG.A.CA..------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------AAC.GGG..C..C.GCAA---------A.C.GG------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------AAT.GCG..C..C.GCAA---------A...GG------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------C.GCAAT..GCGC.AGCC.G.------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------TCCATCATTGAGCAGGAG.GGCCA..GC.T..T...G..AA..CAA.T------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------GCT.GT.CA.CGC.A.ACACTACTGAA..C...------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------ACCT.G.CG.C.C...AT.A.G..GAT.C.A..AGT---------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------.TC..GC..TCTGCC------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------GGCATTAA..CCC.CC.TC.T.A.------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------GGCATTAA..CC..GC..C.T.A.------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              GCGGCG---------------GCCGGCGTCAAGGCGC.GC.TC...A.GCGG..GGCTG.------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             GCGGCG---------------GCGGGCGTGAAGGCGC.GC.GC...A.GCTG.AGGCTG.------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------TTTGACGCGGTG.GCC.AACGC.G...AC.TC...GGGCCTTTCCAAGAGACATCGACACAGTATCGGAGCA
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------GGCAATGCC.CG....CATC..CGCAG.CGCCG------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------ACAT.GAACA.TC........A.CAT..C...T------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------T..ACC..GC.TC.T..C.CCA.......G------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------TCTAGCA..A.C...C.C..CGCTG..---...------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------..A......TC.G.T.....A------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------..T......TCGG.G..C..A------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------..CA.CC.TC.....A...CGA.G..C...------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------..CA.CC.TC.....A...CGA.G..C..T------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------..CA.CC.TC.....A...CGA.G..C...------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------..CA.CC.TC.....A...CGA.G..C...------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------AATAA.C.TCAGG.AT.CTC.GGA......------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------AATAA.C.GCAAG.TT.CTCGGGA.C....------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------..C..CC.TC.......C..G.........------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------GCATGTTTATCCATGCTGCAATCCCATGAC------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------CAT...A...C.AG.TT..TT------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ---------------------------------..CA.CAA.T.C..A------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ACACCAAGCCACGAAACATTGTGCTACCCGA.CG.C.ATCAAG.CA..ACCG.T---...------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------CCAA.CAA..ACC..GCC..A.C.AA.---...------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------C.AC.A---------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------CA.---C..C.C.A.GCGAGGAG..C.------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------..CAA.---C.T...---------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------GCCGCCTCG.TG.CCCCTC.....ACATC.GAG.CCTC.------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------AATCA.G.CC.A..TGCT..TGAAA.CTC.------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------C.GGCAA.TTCGGAAGTCAG.------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------TATGCAAATCA.A..C.T------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------AAC---C.G.CAACCT.T.A.------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------CA.GA.C.A.CAAGTACT.TG------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------C..G..---------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------C.TT.AAC.G..GAG------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------C..CA..AA..GGGA.TGA..------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------C.ACA..A...GGG..TG.GT------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------------------------C.A.CT.A.AGTG.TACCTTG------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------CAC---C..GGCGG.T.CAA.AGCC.G------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------CA.---C..GGCGGCT.CAG.GG.C.G------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------.TGAACGCGA..GACGCCA.TAT.ACATC.------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------C..GAAAGCA.CATGGCGTCT------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------ATCAAA---C.T------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------C.A.CAACATC.---------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------ACGATCACG.C.C.T------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------C.A...ACATC...AAG.ACT------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------C.AG..AC.TC...GAG.ACT------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------C.A.A.GGAGCG.G.A....T------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------C.T------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------C...A.GA.GCGGTGGGC.CG------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------------C.G------------------------------------------------

                                                                                        3871
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------G.ACTT..AC.ATG.AA.G.TAAG.AGG.AGTTGTC------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------C.GAT...G---------------.AAA.CAG.AGC------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------C.GGT...G---------------.AAA.CGG.AAC------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------.GCATAGG.CAAAC.CC.GCAGGATGTACAA.AGGTCCGACGGGCGGAAATTTCCGGCTTCCTAATCCAGACGAGACCGCT---
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------GCA...GT..A.ACGCCCCCCT..AA.GTGT..AGC---GATTCGGAAGTT---------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---TCCTC....AT....ACCCCTC.CT.AAA.TCCT..AGC---GATTCGGGTATA---------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         CTTCAAG.CGCCCTGCAAG.GCCG.AAGTCAA..GAA..CTA------------------------TCCCACCCAGAA------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------TCGGCTC.ACAAACGCCC.CCAGCCTG..CT..ACG------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------..C...ATG---------.CC..GA..A.....---------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------GCG.....TCCT.....T.GCT..A.G...------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------.GC.....TTCT..C.CT.ACT..A.ATCA------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------..C...C.GGCT..ACCCG.CT.GT.G..C------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------..C.....AG.T..ACCTG..A.GT.A..C------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------..C......G....GCCTG.CT.CA.A..C------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------..C.....GG....GCCGG.CT.CA....C------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------..C......G....GCCTG.CT.CA.A..C------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------..C.....GG....GCCGG.CT.CA....C------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------.GC...A.T---T.GCC.TCCT..C.A...G.T---------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------.GC...A.TTC.T.ATCCTCCA.AC.....G..---------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------.........TC...G...G.T..CA.A..CA.G---------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------AATTGGTCCAGCCTTGGAATGCCTGCCCATCCC---------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------C.A.CAATGG..A.CCCG..T.AA..A---------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------C.G...C.ACATACA.CT..T..CCA...CGA.GTTGCGGAACAGGGGACG---------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------C.A...---CAATCAA.T..CGAA.GT...GAACTC---GATGAGGGACAC---------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------TCCAGCGTTTTTATGCAGCAC---
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------------------------------------------TCGCCGTATCTCCGCCATCAC
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------TGG.CC...---------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------------------------------------------AGATAT---
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------.C..C..A...GAC..A.------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------GCC.CC.A...GACA.AG------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------C.ACAAA.T------------.A.TGT..ATA.---------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------.CCGC.GGA---------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------GCCGC.GGG---------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------TGCA.TCGGC.GACATCG---.AC------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------TGCA.CAGAC.ATCCTCG.C..AC------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------A.ACCG..C.A....A..AG.TTCGCCAGTCTAGGAAGCTAC------CCCAATCCTCTCATGCCACAT---
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------CTG.CA..ACCAA..CC...C.ACC.AGG.TTAACAGGT---CCAGGTGGTTAT------CCTAATGCATTTATGCCGCAC---
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------CTGAC...ACC.A.CCCG..T.ACC.TGGGTTAACAGGC---TTGGGAGGCTAC------CCAAACGCATTCATGCCCCAT---
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        3961
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   CTTGAA---------------------------------------------------TCGGAAA.T..T..TTCAGT.CC..GTGATT.T
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ATGGCA---------------------------------------------------------------------..G..C.G.CAGT..
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ATGGCA---------------------------------------------------CCA.ACGG..A.A.TTCG..A..C.GGCAGT.G
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            TTCAAGTTAGTGGGGAAC------------------GTCTCGCATCTAAGTCGTCCC.C.T.CG.G..AA.C....CACCG.A.TCGT.C
Acanthaster-planci_oki20-22_NONE                                                        AGCTCA---------------------------------------------------.C.CA...GGAATCAGT.TT...CA.TCCA..G
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------TTTGAGCCACAGAATAAACGACAA.AAA.TT.ACCA.TT---...T.TGCAAAT
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------TATGAGCAGCCCATAAAACGCCAG.AA..TT.TCCC.CTGC.G.CT.ACCGGAG
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------CCTGG..C.A..A..TC.T..T.CCGAG...AG
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------.CATCC.ATG..C..G.GT..T.CC.TGA....
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------.CATCC.ATG..C..G.GT.TT.CC.AGA....
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------------------GCGGG..GG..GC..G..T..T.C...GA...G
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------------------.CTGGC.G...GC.CG..T..T.C...GA...G
Acanthaster-planci_oki58-6_NONE                                                         ATCAAA------------------------------TTTGAGCCGACGGCCTCGGAGCC.C.CGCG.T.CCA.CGAC...C...GC.TTT
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------------TC..CTGG.T........AC..G..TG...AGC
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------G........---------------CAGTCGAAC
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------------------------------------....CCAG..A.ATC
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------------------------..AGCTAGC
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------------------.A......GT..A..TCAGC..TGC.TCA.A.C
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------------------.A......GT..A..TCAGC..TGC.TCA.A.C
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------------------.A......GT..A..TCAGC..TGC.TCA.A.C
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------------------.A......GT..A..TCAGC..TGC.TCA.A.C
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------------.A.T.....T.A...CCA.....CAAGG.AG.T
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------------.....C..GT.T..ACC.....CCAA.G.A...
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------------.CT.....G...A.........GCA.TG..A.G
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------------AGCATGCTCCCCGTGAGCCACAATGCCAGCCCA
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------CCTG..AGAA.GT.CTCA.C.G...GATCTT.T
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               TTCAGT------------------------------CTTGACCAAGTTTCGGTGGAAGAT...GCGT.GC..GCGTTTG.GAG.GCTA.G
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            TTTAGT------------------------------CTCGAACCAGTCTCTGTAGATGA.G.CAC.G..T.AG.ATT.G.C------A.C
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------TTTCAGCAGAATATGCAG---...C....GAGGCCATCG.TT------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             TTGAGC------------------------------TATGGACCCAGTGGAGCT---GC.GGAT.G..GCCC...---------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                TTTCAG------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------CCT------------------------------..TT.CC.TCAT..T
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------CCGCTCAGCCGT---TT.GGTA.T..TCCA.CAT..G.GTATCA.AAC
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------CTGCAGCAGGCAATGTTT------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       TTCTCA------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---TCA---GCCCAGCGCCAGGCATGTATGTAC------------------------------------------GC..GCT.TGCT..C
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---TCG---GCACAGCGGCAAGCTTGCATGTAT------------------------------------------GC..GCT.TGCG..C
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------ATGAGCAGTGCCGCCAAATCTTAT---------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------GACCCTACCGACAAC---.C.GGCG.GT.GC.CG.GT..GG.A..G....C
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------GACCCGACCGACACC---.C.GGCG.G..GC.CG..T..GG.A.GG....G
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------CTGTCGAACTACCCCCAGCAACGCGGCGGCGACCCAATCAACTCT---.A.TATT.AT.TCC..CTG.TTCA---TTGGAC
Ptychodera-flava_PF18712-t1_NONE                                                        ---------GTGCAAAATTATGCACAGCAACGA---TCGGAGCCGTTGGCATCA---.ATTAC..GGG.TCTG..G...C....GTAAAT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            TTCGCC---GCGGCACTGCAGTCTCACCCGTAC---CTCCATTCAAACCACCTG---TC.GCTT.GT.A.CAGCTATGTCA...CA.GGG
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TTAACG------CCAGCAGCTGCATACCAGTTC---CTACACCCAAGTCAAATG---.ATGCA..GAGT.CTGCAATGTCAAGT---AAC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            TTATCCGGTGCTGCAGCTGCGGCTTACCCATTC---CTACACCCGAGCCAGATG---..TGCT...A.A.CCGCTATGTCA..AG.TGG.
Ptychodera-flava_PF10086-t1_NONE                                                        ---------GTTGTCATGACAACGCATGACCAA---GTCGAGGACAATGATATT---C...GTT.GA.TTCA..TACTG.CA.T..AAA.
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------CCGAGCTCAAGA---CTTTCTCCACCTAGTTCA---C.AC.TTCT..T.CA..T.TAC.CCTTG.TT.G
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------GCTGCAGCTGCCGCAGCGGCTGGC---TTGAATCCCGGTGGCGGT---...TAT.CGT.ACC..ATATATCG.TGG.T..G
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------TTGTATAGTAGA---CCATTCAGCAAGGATGTG---.CA.GT.C....AATGTGACTGTA.TTCAG...

                                                                                        4051
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   GT.GGATC.AATTAC---------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ..CGGAGAGGAG------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   .AGGGAGAGGAG------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            A.GT.TTCTC.GAAG---------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        AACCAG...C.ACAC---------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            T.GT.GCCAATATTA---------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        T..TTGCCAAGTCGT---------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             GAGGT.CTGG.ACCT---------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              A.GTTTCCA...ATG---------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  A.CTTTCCTG.AATG---------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              T.G---------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             T.G---------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         GAGTT.TC.GAATTCAGGCAGACCCTC---------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             T.G.G.G..GG.GGCATCGGATCTGCGCCGAGTACTGGTTGCTTCAGCAGTTCCTACGCCCAATCCGGCTTCATGTCGGTCGATGCCAGT
Crassostrea-gigas_EKC28765_Brachyury-protein                                            A..C..GC.C.G------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       A.C....C....------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            T.C.TGCCAG..------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            A.AT.GCA.C..------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        A.G...CA.A.G------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    A.C..ATC.A.G------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   A.C..ATC.A.G------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    A.C..ATC.A.G------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   A.C..ATC.A.G------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  A.C.G.CCGGGG------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ATC.ATCCAGGG------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            G...........------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             CCTACCAGCTCC------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                G.CGTTCTTGGT------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               T.C.G.GC.AG.CTC------------------------------------------ACACAATCTGATTTCTCCACCGTCGAT------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ..GCATCAGGGTTTT------------------------------------------GCAACAAACGATCTTCTTTCAATAGAGCCTTCC
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               GGGTA.GAAC.A------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            TTGTAT.A.C.ATTC---------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ..C..GGA.C..GTG---------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ..C.G.GAGC.TGTG---------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    T.CTT.CAAGAACTC---------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   T.CTT.CAAGAACTG---------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GAGGGACCGC.ACTG---------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        GAA.GTTCTC..ATG---------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            AAC---------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               G.AGGG.A.C.TTAC---------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            G.A.G..A.C.TTAC---------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        GAC.TT..TGAGATT---------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            G..GGGTC....TTC---------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ..C.TTCA.C.G------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    T.AGTATCGCAT------------------------------------------------------------------------------

                                                                                        4141
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------CCGTTCCCGATTCCAGTGCCTACA
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------GGAGCTGGC...------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------GCGGGC...GGGAGTAGGGGC------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------GCAGG....GGA.GTCGAGGT------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------GGC...GGG.CCCGCAGC------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------GGC...GGC.CCCGCAGT------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             CCCACGGCGTCCGTGTTCTCC..T......AGC...CAGAGCAATGGCAATTACTGGAACGCCACCAGCGTGCCGGGACCCATGCCCATG
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------CAGTC...A...---...A.....ATG.GA------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------TCGCA.......GGA...G.C...C..CCC------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------TGC.....A...GG....A.....C.CTCC------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------AGC..C..A..T..ATCAA.....CAGA..------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------GCGCCC........AGC.A.....C.C..C------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------CACGCG..........A...C.....C..C------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------CACGCG..........A...C.....C..C------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------CACGCG..........A...C.....C..C------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------CACGCG..........A...C.....C..C------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------CCC.....T.....TT.T........A...------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------CCC..C.CC.....GT........A.CA.C------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------...........G.A.T.A.....C...------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------AGTCAGTACCCCAGCCTGTGGTCTGTG------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------------------------------------GATCCCATG------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---TCATTTGATTCGTCGA.T.T.GGTGC..AT.....GTAC------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            TATTCGTTAGATTATCC...A.T.A.G.C.AC......CTAC------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               CATTTACAGCAG------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            CACTTTCAAATA------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    CCCAGCCTGGAAGAC---------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             CCCAGCCTAGAGGAC---------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    TCGGTACAAACCGAC---------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   TCCGTGCAAACAGAC---------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ACGTCATCACAACAG---------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ACACCATCACAAAATTCG------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TCCCACCTCGGTTCT---TTTA....AGCT..ACTTCAA---------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            TCTCATCTCGGTTCTGCATTCA....AGC.T.ACTACAA---------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        GAGGACATG---AGAGCAG.A.TT.GGC.ATGTCT.C.A------------------------------TTGACTTTTTTCGTCGCCATG
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TCATCACTACACGGTTC...TCCA..TGT.G..AC.C.CA.C---------------------------TACCCTACACCTCAGCAGTTG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------.CG..GCATT...T.C..------------------------------TACCTGTATCCACATGGCCTG
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------CCCATT.T...GTATT.A.ATC.G------------------------------TACACTACAACCTCCCCAAAT

                                                                                        4231
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            TCGTTAGCCCCG------------------ATCATTGTGCAGAACTCGCTTTGT....C.CAGCAA.GACAG.AAACGCTG..ACAG---
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------GGAGGGGGTGAGGG.A...AGAAACAT..CCCAG.G..AAAGTTG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------------------------------------------------.AGAATT.A..A---------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------------------------.AAAGTT.A..AAT.G.GA.....---
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------..CCCGCAGT.CTGC---
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------..CCCGCAGT.CTGC---
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------...G.G..TA.ATA.CA...ACT.CG..GA.TC---
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------AACGTGTGCAGTGGCCGCAACATCTCATCTC.TAA.T.TCCGT.G...ACGAATGGAT.C---
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------.A.C..ATG.GAAA..T...AAC.AAT...AAC---
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------GCT.C.TC.T...CAGT...TCC.G..TCAATT---
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------------------...G.C.CAA..TCC.GCTTC
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------G.A------------..A....TGA.TAGT..T---
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------......---...C.A..G..A.T.A..ACA..C---
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------TC....AA.AA.C.G..G..CAC.A.G..T..GCAG
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------TCT...AA.AA.C.G..G..CAC.A.G..T..GCAG
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------TC....AA.AA.C.G..G..CAC.A.G..T..GCAG
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------TCT...AA.AA.C.G..G..CAC.A.G..T..GCAG
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------......A.T..T..A.GTGTCAC.AA..CA.G.---
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------.....T..T....GAGG...CA.TGGG.CA.GC---
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------..T...A..A..A.........CGC.T...T..---
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------AGCAACGGCGCCGTCACCCCGGGCTCCCAGGCA---
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------CTGCCTGCGC.T.AAAGT.G.T.T...CCGCT.AGCATG---
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------TCG.CTAAT---------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------CCG.C.AAT---------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------GTGGATTTGGCATGTACCTACTTTGGG..ACC.CAT.AG------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------ATTGCAGCTGCCTATTTTGGT------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------AGGAGA------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------ATCAGC------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------ATCAGC------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------TCTCAATCGTGTATGGCGTCATCAAA..A.CAG---------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------CTGGGT.CT---.CG.A.A.G---------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------CTGGGT.C.GCA.C..A.A.G------.C....GC.------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------CAGTGTAGCCTCGGTCTGGCACAGAAT.CT---------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------ACGCAGTGTGGGATGGGTGTTGGTCAT.GG.CA---------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------GTGTTTTCCGGTTCCGGGTCT.TTAA.C.G.CGCTA.T.CATG.GGCC.TGGCC
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------GCTGTGGTGAATGCAGGGGGGATGTCGTCGCT.CA.CGT------..TTC...A..AA.T---
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------GCTGTGGTAAACGCAGGTGGAATGTCATCGCT.CA.CGA------..CTC.G.T...AACCCC
Ptychodera-flava_PF10086-t1_NONE                                                        TTTCGATTC---------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TTTCTCAATCCTCATGCGCTTCACGGTGCCGTA---------CCAGGTCTAGGGGCG.TGCAGCA.A.GCTA..CTTTAG.AGC------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 TATCCACCGCCGCAT---------------------------------CTGGGCCTGCTGCA.AAT------..C.CTG.AGC.------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    TTCCCTTATTCT---------------------------------------------------------------------GTC------

                                                                                        4321
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------------------------------AGC.A.AACGAACCGCA.TGTCCT.T.GTC---------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ---------------------------------------------------...AGGCCCGAGTGGA.AAGCCCCAG.AAA---------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ---------------------------------------------------..CAGACC.GAATGGA.AAGCCCCAG.AAA---------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------------------------------------CAGCAGCAGCAT.AT.AA.GACAACTGCCTTCACCAT..GATTCCATCACC
Acanthaster-planci_oki20-22_NONE                                                        GCAGAAGGAAATGGCTGCGGTATA---------------ATGGACAGTGGACAGCTTCC..GGTTGAACACCCCTC..TCTGTA------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------CGA.AT.AAAAAGAA.CAA.CGAACCTATGAAAGAG------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------ATAAGAAAC.A.AC.AAAG.A.ATGAACC.AGAGGTAAT------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------------------------CCT.T.GCACCCCAGTACCCT------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------------------------------------T..TACCAG------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------------------------------------T.TTACCAG------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------AGCAAGTCGGGCTCCGTGCTCT..TGC.GGCC.AACAGC---..GGCGGCG------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------GGCACCAAGTCGGGCTCGGTGCTGC..TGC.GGCC.AACAGC.CC..GGCCGCC------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------TCTTCGGCCGCTGTGAGCCGCT.CAT.AA.CGAC..TC....CCTTATTTCAGT------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------------C.GAG.TATA.G.C.TCCTC.CCCAG.------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------------------------------TGT.CAATG------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------AGCTGCAG....GGTTC.CCCG..CCAA.G------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------CCTCAC---GTCAGCT..CC.CAGTCACC...CCCAA..------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------AA..CA.CCA.ACCAA.G------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------AG....CCCA.ACCCA.G------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------ACGCACATGTCC.GCA..A..GG..CG..T...CC.CA.------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------ACGCACATGTCC.GCA..A..GG..CG......CC.CA.------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------ACGCACATGTCC.GCA..A..GG..CG..T...CC.CA.------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------ACGCACATGTCC.GCA..A..GG..CG......CC.CA.------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------------AGT.AG...AA..G.AACACTTCAAG.------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------------C.G.AG...CA.GC.A.CACCCCA.GA------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------------AGC.GGA..........C...A.CT..------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------------GCAGCCGTGTCCAACGGGCTGGGGGCC------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------CAC---ATTCA..GATACAATTCAAACAGTCCAAT.------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------CAC---ATGC...GATATGTTTCAAACAGTCCAAT.------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------TATGGAGGA------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------GGAGTT------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------------------------...ACC..TCCCAG.------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ---------------------------------------------------.ATT.A.CC.A.GCTCA.AATCC..AATAC---------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------ACTTATTCGCCCTATT.AACAA.TC.GAT.A..CCAAA.TACAAT------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------GGCTGT---------------------------.GGC.T.CAG.ATC..CTTGTCCTATTTAT---------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------A.CTACCC.---------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------CCAAACCCT---------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------CAGCAGTGCCTGAGCAAGACTCTTC.GTT.AATCCAT.AATTATG------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------.GGCGACCCA.ACC.T.G------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------.TCAG..CA.GG.GG..AG.TCCT---------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------------------------TGTAA.AC..GGCC.A.CG..CC.T..TACAGC------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------------------------TGCAA.AC..GGCCAA.CA..CCTT..TACAGC------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    TGTAAGAACGACACCGTCGGGCTC---------------AACCCTCCCGGTA.G.....CCTGCCGTCCTACCCC...------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   TGCAAAAACGACGCCGTCGGACTC---------------AACGCTCCCGGGA.G.....CCTGCCGTCCTACCCC...------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------AGTTTGTCCGGAAGA------------GCATCGTGCGCGTTG.AC..T.CAATGGC.A.CAAACCACAA------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------AATATTGTCGGTCGG------------GCCTCGTGTGCAGTT.ACAA.AC.ATG.C.A.TAAACC.CAG------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------TATT.CCC.CTT------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------AGCCTTTCCA.ATCAACAACTCCAA.A------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            GGAGCCAATGATTTCGGCGGCGGT------CCCTCGTCGTCCAGAGCCTCGT.TTT.C..C.ACCGCACAGTCCA..GGCGCTT------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               CATTCCCAGTTTCTTGCTGGGCTCGGTGCAGCTTCATCGTCCCAACCACTAT.TT.AT.A.T.TC.AATACTCCAC.G------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GGATCCCAGCTCCTTGCAGGATTAGGAGCGCCATCCACATCTCAACCTTTCT..T.AC...T..C.AACTCTCCTC.G------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            TCCTCCCACTCCCCATCTGGA---------------------CATCCG---AGTTATT.AGA..C.CAT.CCTTC..T------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GCGGCCATGAGTCCGGCTGGCCTG------------------AATCCG---.GTCTGC.C.T...T.CC.AACT...G------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    GGCTCCATGCTTTTGTCTGGA------------------------------------------TCTTCATCTCTCT.A------------

                                                                                        4411
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------.G.AAGGAG.AAGCGGAGGAAACTGAA---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------A..CGT..GT.TGGGGATGACGACGAT---
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------A.ACGC..GT.AGGAGATGAGGACGACAAT
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GCGAACGCAGATAGCAAAACCATTCATTACCGTTCTTCCGCCGGAAT.G..G.TGATCTTC.TACC..TT.T------------------
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------------------AGC.C.AGTGAT.C.AGTAAC....AC------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------AAGA.ACCTAATTTA.A.CAGTAT...AGTGCG---------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------GAAG..CCT---------------..AATTAAC---------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------------------.CCAAGA.GG.CCCGG..AGCTGGTTCCGCCCTATGCGGACT---
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------------------------------AGAAAAA.GACCACAGGATTA..TTG.AGCTCCAGGACAAGT---
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------------------------------AG.AAGA.GGCA.CTGGACTA..ATG.ACCTCCAGAACAAGC---
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------------------------------GC.CG.A.GGC..C.GG.AAC...TACCTGGGGGAGGAGGCGGAG
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------------------------------GC.CG.A.GGCC...G..AAT...TACCTGGGCGAGGAGGCCGAG
Acanthaster-planci_oki58-6_NONE                                                         ---------------------------------------------...AAGAAAGCT.C.A.TATC..GCG.------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------------------------------T.CAC.A.T.ATCA.CTGACG..ACAC------------AGTCAT
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------------------.CA.A.C.G..TTCTC.TAAC...---------------------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------------------------------TCCC.AC.TA...CAG.T---------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------GGC..G.....AAA.C.TCAC..AA.CGCG---------TCACAC
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------GGAA.TA.T..ATCGC.A---------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------GGAA.AA....T.CTC.T---------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------------------------------......C.GA..AC.A..GCG..T...------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------------------------------......C.GA..AC.A..GCG..T...------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------------------------------......C.GA..AC.A..GCG..T...------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------------------------------......C.GA..AC.A..GCG..T...------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------AT...TC.AA....TAATGTA...---------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------GCA..TC...TC..AAA.---------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------------------------------......C.G..T.....T---..G.T.------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------------------------------CAGTTCTTCCGGGGCTCC---CCCGCG------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------..GC.A------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------AGCGAA...GAACC.AA.---------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------AGAAG.C.GGAA---------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------ATTTTT..ATAT------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------TC.CAGC.GGTCAA.C..AAC...AGC------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------AATCAA...TTC------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------CCCG.TACGC.GTATCAAG.TCAG..GA..------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------C.ACAA..ATAT------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------.AAACG.TGCAAA.TTAT------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------TCTACACATACG..TTTT------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------------AT.C.T.AT.A.AATGTTTTT..AA..GGG---------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------AGCC.GG.TG..TCAG.ATCC..TTAT------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------.TACTG...ATT------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------AGTTGCACAG.GTCT.C.ATGCAG...AT.------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------AGCTGCAC.G..ACCAC.GTGCAG...AT.------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------------------------G..A.CTC..T.CACA...GC------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------------------------G..A.CTC..T.CACA...GT------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------------------------------.G.AT..C.ATACAG..AA.A------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------------------------------------.G.AT..C.ATACAA..AC.C------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------..T.TC..GCA.ACG..TTTA------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------------------------..ATCA.CTCATCAT..GTTA------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------TCATCAC.G..AAC.TCAGTGGGG..ATACGCGAACTTCTTTCCGTAT
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------------------------C.TTCT.CT.TTAAT..TTACGCTAACTTCTTCCCATAT
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------------------------C..TCC.CG.T.AAT..ATACGCAAACTTCTTCCCGTAC
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------..TG...CGG.ACACG.T..AGGACTTCTTTCCTCGCAA
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------------------------------------C.GGCC.C.CAGCAT..G..T------TTGTTTGGCCAC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------------------------------------CAGG.CTTACAGATG..ATTT------CTACCTACTTCC

                                                                                        4501
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   CAGGAGAACCCAAGA---------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 CGCGACACGGCGGCA---------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   CGCGACGCTGCCGCA---------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              AGC---------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             GGC---------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             CAGTACAACATGGCCCAAACGGATATCTATGGAACCGGAGTGGGCGTTGGGGGCGGGGCAGGAACAACGGGATCCCCGCAAGCGGCATAC
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            CAGCACAACCTCGCC---------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------GCA---------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            TCTTATAACCCATAT------------------------------------------CTACCTGCCGGAGGCAGACCTTTCGTATCGGCC
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               GGATCAGCAGCAGCT------------------------------------------GCAGCAGCGCTAGGGTTTCCTCCTCCGGCTGCT
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GGATCCGCAGCCGCA------------------------------------------GCAGCAGCTCTTGGGTTTCCATCTCCAGCAGCA
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------ATCCAT
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            GGGGGAGCGGCCAGC------------------------------------------TTTGGCAGTCTC------TACTCAGAGGCCGCT
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GCCTACGCGGCGGCG------------------------------------------GGTCACACACCG------GTATCACCATTACAA
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    GGTCATTCGGAACTT------------------------------------------GGACATCTACCT------CCCTCTCATGCGCAT

                                                                                        4591
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             GGTGCAGCTGCCCACCAGGTGTACCATCCCACGCCCACCTCACCCACTCACCAGCTGTACACGAATGCGGTTCTCAATGCGCCCTCGGCG
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------GACAGG---------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------GACAGG---------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                GCGCTCCAGTCCGCCTAC------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            GCTGCTAAAGACGCAGAC------------------------CCGTCGGGTAGATTAGGACAGACAAGAGCTCTG---------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               GGCGCATCTTCTTCTTCCCTTCCAGGCGGAAGAGCCGAACCATCATCTGGAAGACCAATTTCCCCCTTGTCTTTA---------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            GGGGCGTCTTCTTCATCTTTACCCGGGGGAAGAGTGGACGGGTCCTCCGGAAGACCTATGTCGCCCATGTCCCTC---------------
Ptychodera-flava_PF10086-t1_NONE                                                        GCCTTCCAGTCG------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            GCCCTCAGCTCCATGTAT---------------------------GCCAGCAACCCGTGTACTAGTGCAATATTG---------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GGCCTAAAGAGCCAT---------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    GCGTTGTCAACTCTA---------------------------------------------------------------------------

                                                                                        4681
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------TACCGGTCTGCGGAAGACACATTCGGG---------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             CTAAGCTATTCCGCCAGTGGTTGGCACAATGGATCCGGGGCGGAGTAC------GGACTGTACCAGAACGCTGCC---------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------ATGAACGACTGG------------------------------------TGTCAGAAC---------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---GACTGCGATGGTCCCGGGATTCATCGCCATTCA---------------------TTGATACAGTCAAATACACGGGGAAGCTAT---
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------GCCGAAAGCCTCTACAGACATTCA---GCGAAATTCGGTAAAGGCGAATCGCAGAGCGGTCACAATTTATCG------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------GCCAACCGGCTGTACCGACAG------------------------------ACCAACGGCCACCATCATTCCTTCAAC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------GCTAACCGGTTGTACCGCCAG------------------------------TCAAACCACCAGCAACATTCCTTCAAC
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------AATGGACAT---------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        4771
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------GAGCCA------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------GCCGCGTATTACCAGCCGGAATACATTCCCCTG---------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------------------------------------------TCAACGGCGCACGGAATGGCT------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------------------CACTCAGCACACTACATACCG------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------CAACCGGAGTACTTTTAT------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------TTCCCC------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------TCCGTATCGCCA------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------CGATCTCCCCAATTCTGCATTCCA---------------------CCGCCAATTGATATGATGTATCAGAAT
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------CTGCATACTAAGGCTCCGACGCTGACTACCGGCCAC------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               AAAACCTTCACCGACCAGTCTTCACCGCCTCTGCTTGTTCCTGGGATGCTTCCTTCATCATCACCGAGAATAGGAGCAAACTAC------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            AAAAGCTTCACCGATCCATCTTCACCGCCTCTTCACATTCCGGGAGTTCTCCCATCTTCCTCACCGAGGGTGGGCACCAGTTATTCGAAC
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------------------------------------CCCAGA---------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        4861
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------AAGCGCATG.GT...GAGT.AT.TC.G---------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------AAACGGCTCAGGACGGA.GAA...C.G.CAAACTA.GAC---------------------------.AAA.A..CGGG
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------AAACGGCTCAGGACGGA.GAA...C.G.CATACCA.GAC---------------------------..AA.AC.AGGG
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ---------TCGCCACAATTAG...TTC.C.A.T..C..AG.AT.CA.A..---------------TCTACTGCTTGTC.AGATA.CCA.
Acanthaster-planci_oki20-22_NONE                                                        ---------------------------------T.GC.AGCGA.TAAAAG.------CTTCGAATTTCACCAGCCAGCT.AGGT..G...
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------CGTACACATGGCA...TTTACAG.TA.C.A...A.CTAT.AC---------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------CGTCCCCATGGTA...T.TACGGGTATC.....T.TTA..AT---------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------------..GC..ATGGAACC.GGC------------------------CCT.GAGG...AGAG
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------C.T------------------------------------CCA.GCTT....GAA
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------C..------------------------------------ACT.T.TT....GAA
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------CTGGCTCCCG.GCG.T.C..T..GC.G------------------------------------------GG.G.CGAG
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------CTGGCCGCCG.GCG.T.G..G..GC.G------------------------------------CCC.GCG..G.CGAG
Acanthaster-planci_oki58-6_NONE                                                         ---------AAATCCCTTGAC.TAC..GGT.A.G..C.TAGA.GCCAT..AATT---GTAGAAGGTTCTCCTCTGTTCAG.G.A...A..
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------GAGATCGG...TG.CA.T.ATC.GTTGGA.CC.GTT---------------------------.ATGTT..AAAG
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------------------TA.C.GTT.A.CTCA...---------------------------AACA.A..GAT.
Acanthaster-planci_oki15-190_NONE                                                       ------------------------.....CAATTA.---------AGTCA.---------------------------C.CAG.A.C..G
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------CCGGTAGCG.GCGGT...C.GTCCG.C.CGGTC---------------------------A.AA..G.GAA.
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------...GGCT.GA..C..GCCA.CA.GAGT---------------------------.GAA.GAACAG.
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------...G.TA..A..C.GGCAT.C------------------------------------A.GGGCAG.
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------.C....CATT..A..C..ACCTGCACGGT.---------------------------C..A..A.GG.G
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------.C....CATT..A..C..ACCTGCACGGTA---------------------------C..A..A.GG.G
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------.C....CATT..A..C..ACCTGCACGGT.---------------------------C..A..A.GG.G
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------.C....CATT..A..C..ACCTGCACGGTA---------------------------C..A..A.GG.G
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------T.AC.TAC.GT.TCT..A---------------------------T.CGT.CAAAT.
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------C.AGC.GT.ACT..A---------------------------C.C..T...GTG
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------........CG.T...C.A.....C...A.T---------------------------..CA..A.C...
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------CACTACACACCCCTCACCCATCCGGTCTCG---------------------------GCGCCCTCTTCC
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------GGAT.T....GTA..GGATTGG.AGACTC...C---------------------------C..GGTAGCG.T
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------...GTGATATGA------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------AAC.CT...GA.ATGTCGC.G..AGACTGT.TA---------------------------AATGTGG..G.G
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------AGAGG...TGACGTATCACAG..AAATTA.GTC---------------------------A..ATGA.G..A
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------GCGATTCAGG..TCAC.TATGTAT---------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------.CTCCGCAGATT..GC.AATG------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------G..CTGGGC.AGTCGC.GATGA.CAA.GGCACC------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ---------------------ACTCC.GACAGT..TC.AG.CAGCTCGAAT------------------------TTATACG.TGAAG.A
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------....TTA.TG.TC.GAC.T..A.G.AC---------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------AATTATGAGTAC.GAG.AGA.TAT...C.T..CGAT.AGCA.CTA------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------------------TCAC.GGTATTAACA------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------------------G.TC.TGT.------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------.ATT.GT.GC.AGCA------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------..AC..A.CGATAGA..C---------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------TCAC..AG.GGCC....A---------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------------------T.AC..T.C.A.CAT.TC------------------------------------..T
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------------------..AC..T.C.A.CA..TC------------------------------------...
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------CTCTACT..CCGCAT.A.TCTC..AT.AACCG.------------------------------A.AT.TC.CG..
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------------------..GC..GTCT.CAA.------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------------------..GC..GTGT.CAA.------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------CACATGACAC.G.GTTA.A.GC.ATG.AACAA.------------------------------AAAT..A.....
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------CACATGACAC.GGGGTA.A.GC.GTG.AACAA.------------------------------AAA..G---AAT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------GCCCGTCAAAT.CT.CAGT..G.TC.AGTC------------------------------------.TT..TCT.GG.
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------A.GC.AATG------------GATTTACTTGCACATTGGCAAATG..AA.ACTC.T.
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------TCTCGCTTTTCACCATAT.A.A.TC.GA.A---------------------------------------------GGA
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               AACGCTAAAAACTCGCGATTCTC.CCTTATG.GA.GC.ATT.TTC.GT.TTCCTTCATTTCGTACGCACCCCGGTAAC.AAG.AAA.GGG
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            AGTGCGAAAAATTCTCGGTTCTC.CCATACG.AA.GC..TTCTTC.G..TCCATCCTTTCAGATCCGGCCCGGGCACC.AAT....GGAA
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------T.TC.GTTC------------GACGATATTATGGAGTATACAACTT.AAAG..AGGA
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------TTAAGGTTTTC.CCTTAC.A...GC.G---------------------GTCACCAGCACCACCATG.TCA..A.AG.T
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------CGCTTTTCGCCGTACAGTT.GC..---------------------------------------.GCAGT.TGGG.
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------AGTC.ATTT..T..TC.GAG.------------CATCCTTTGATGCAGCCAAATTATT.TAGTCTC..T

                                                                                        4951
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ---------------------------GTTCGAAACGATAGC---AGA------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ---------------------------GTGGAGAATGACAGT---CATTCTATAGATA..GA.A..A.T.CAC.GCAA---AATAAT---
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 AACAACTACGAC---------------GTCTACAACGACCAA---TCAGGAGACGCCACG..AT.GT.CGCTC..CC.---CCGGAGCAC
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   AACAACTACGAC---------------GTTTACGACGACCAA---CCAGGAGATGGTACG..AT.GT.TGGTC..CAA---CAGGATCAC
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AAG.TACTAGACAGACAGGACATGACCTGGCTCAATACACCA---CCTTCTTCAGACT.C.....GGAT.C.A.GTCCAACTCGAGCGAC
Acanthaster-planci_oki20-22_NONE                                                        TCGG.CACTTCCGGGTCGTCTGTTCTCACTTCTGGGTCATCA---GCATCCACGTGCCC.C.T..T...ACATCC..A------CCTTCG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------GGTGCGGAT..T.AT..T------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------GGTGGAGGCGAA..C.A...TGGCC.A.CTTAC------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             GGACG.------------GGACCAGAGGACCAGGGTCCCCCCTTGGTGTGGACTGAGATTG....C---AT.CGGCC.------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              GATCA.CTTTCCAAGGAGAAGGTGAAAGAAGAAATTGGCTCA---TCCTGGATAGAGACTC.G..CTCCAT.A.GTCT------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  GATCA.CTCTCCAAGGAGAAAGTGAAAGAGGAAATTGGCTCT---TCTTGGATAGAGAC.C....TTCCAT.A..TCT------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              GAC..C------------AAGCCCAAAGATTTGTCCGACTCT---AGCTGGATCGAGACGC.GT.GTCCATTA.GTCC------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             GACG.C------------AAGCCCAAGGACCTGTCCGATTCC---AGCTGGATCGAGACGC..T.CTC.AT.A.GTCC------------
Acanthaster-planci_oki58-6_NONE                                                         GGAAATCTTCGC---------------------------------GGCAAACTGGAG.C.GAG..CACCGTTC.G.TT------TCTGGC
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---A.ACTGGAC---------------------------------------GACCCCCAGG.TG.CA.....A.GCC.------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            TCAAGTGTGCCC---------------------------------------------AATGTGA.TG.T.CAA.CCC.------------
Acanthaster-planci_oki15-190_NONE                                                       ---..C---------------------------------------------------ATCA.AGGGG..C..CGCCC.------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---...TCAGAAGCG---------------------------------CATGCGCTGA.TCAGT.CG.CATG.CGCCA------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---.TA------------------------------------------CATTCCGGTCAT..G..TA.C.....GTC.------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---CT.CAT---------------------------------------CATACCGGACAC..T...G.C.....GAAC------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---..C---------------------------------------------------A.C..T..GG.....C.C.AC------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---..C---------------------------------------------------A.C..T..GG.....C.C.AC------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---..C---------------------------------------------------A.C..T..GG.....C.C.AC------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---..C---------------------------------------------------A.C..T..GG.....C.C.AC------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---C.TCTGCAG------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             CTC..CACCCAA------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---A.A------------------------------------------------------..............T..A------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---TCG---------------------------------------------------GGATCCCCACTGTACGAAGGG------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                GTG...TTCGCT---------------------------------------AGCGAACA...TTGC..A---------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---A.AGAAGAA------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---G.AGATGTT------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------C.A...GCAGCGATGCTA---CAGGCGGGT
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------C.A...GCCACAT.T---------------
Acanthaster-planci_oki84-25_NONE                                                        ---------------------------------------------TGCGCGGCGGACACC.A....ACC...C.CCC.------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                GCAA.ATGCATT------------------------------------------------.A...GA..AT..G.TCAGCAATCGAAGGA
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ---------------------------------------------GACAATCTGCAATCC..GGACA.C....CT.AA------CCCGGC
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------C.T..G------------------TCTGAT
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------TCTGGG
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------G.A..GAC.GTACCC..C------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------TT..A.T..T.A....GG..A---CTATTTGGA
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------------------TTC.A...TA....T------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    GCCCACTTCACC---------------------------------------------TCGGGG..T...ATGCCCC..---CTCAGCAGC
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             GCTCACTTCACC---------------------------------------------TCGGGG..C...GT.CCTC..---CTGGCTGGC
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              AGC..TTTCTTG------------------------------------------------C..GTGTCCAC.ACT---------TCCGGT
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------G....C.......CC---------AGCGGC
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------C.G..C.......CC---------AGCGGC
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GGAGTATTCCCC------------------------------------------------GT.G.CA.....AGT---------ACAAAC
Ptychodera-flava_PF18712-t1_NONE                                                        GGCGT.TTCCCA------------------------------------------------GT....A.....AGC---------AGTAAT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                CCGATCTTTCAG------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 CCACAATTCTCAATGGCTCTTAAT------------------------------------..A..TGCAGCT.CT---------GCTTCA
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            AGTCACTTGGATTACGCCGGCCACCGCTCATCCGTTCATATC---GAT------------.....CAGC.CAA..---------TACGGA
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               AACCGATTCGATTTTTCCCAACTTCCCCGAACGCAGCAATCC---GATTCGAATGAT---..AAA.TGTCGTAG.---------TCCGGC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            AACCGCTTTGACTTCTCGCACCATCCTCGCCCACAGCCATCC---GAATCCTCTGAGCCGAGT.A.AGAAGAAG.---------TCCGGT
Ptychodera-flava_PF10086-t1_NONE                                                        AAACGTCTG---------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            AACC.CCTAGCC---ACGCCCATCCCATATGAAAGCGCGTTA---CATTCATCGCTC---..AG.GT.CGGT.GG---------TCATCT
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 TCCG.CTTCGAT---GCAGTGACTCCTGGATCGAACGCAAAT---CGCTCGGGAGAT---C.T...GGCGG..GC---------GGCGGC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    TCA..TCTTAAC---GCACGGACACCGTCTTCGCCGTCTCAA---CTACCG---------------------------------------

                                                                                        5041
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------ACAAACTTTCAAGATTTTCAGT.T
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ATGCAGTACCATCGC---------------TACAA..GCTA.TACTCGGCAAACCCAGAAG.C....GACACTATTACGATAGAAATAGC
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ATGCAATACCACCGC---------------TACAAT.G.TA.TACTCAGCAAACCCAGAGG.C....GACACTACTATGACAGAAAT..G
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AGTGGGGGTCAG------------------..T...AAACG.CAGA.G..GTCC..AGAG...CTATCTGAAGGCACCTCTCCAAAGCTG
Acanthaster-planci_oki20-22_NONE                                                        GTCTCTTTCCAACATGGA------------AT..A.AGCAG..T.TC..CA.A..G.GC..T.C.GTGTTCCGATCGCTCGTTG...ATG
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------..T.TT.C.GAATATCCCAGCATTC...GT
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------------------------------------------CAG..T...A..GAGTACCAGACAGTAC.A.TT
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------------GAAT.CAGT.ATT.AGG.CTGGG..AA.GAGA.TCTA.GAGGAGGCGCGTGTCCCCCTATC.T
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------CTAGATT.CAA..ATT.TGGG.T.TA.AC..GTGCTTGTA.GAGAAGACGGCTCTCCCCTAG.A.T
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------CTAGATT.CAAT.ATT.AGG..TATA.ACCAGTGCTTGTA.GCGAAGGCGGCTGTCTCCTAG.AAC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------ATCGATT.CA...ATT.TGGGATTTA..A.C.GGC.---A.AAGGAGGCGGATCTCTCCCT.G.AC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------ATCGACT.CAG..ACT.GGGGATTTA..A.C.GGC.---A.GCGGAGGCGGATCTCGCCG....AC
Acanthaster-planci_oki58-6_NONE                                                         GATTTCTTGTTG---------TCACCGAGCAAT.TGT.A.GGGT..CTGCTTC.CGGGCTG.CC..ATTTCGGGATCTTTTCCA..G.TT
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------AGC.AT.A.CAGGGCTCGG..A.AACGCTGG...G..C.AGTTCCTCCCTGAAGAG.T.T
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------..A...T..T..---TCGT...ATAC.TC.A.A.T...ATCATGTGACATTTCAT..TTC
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------C.A.TT.GAT.A---ATGTCGTC.TG.GC.GG....C.GAACTACGGCAGTCCTT.T.AG
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------ATTT.G.TCC..---ATTTCGAC..TTGCTGG.C.T...ATGAGCGGGTCGCCT.....T
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------T..CA.A.C.A.---------..TCCGGA.AC....ACAACCCACCAAACTTTGT.G..G
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------..CAGTT...AT---AT.TCA....C.GA.GCC.TT.CAGCACATCACACAGCGA.G..G
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------T..CA..A..TG---TCTTC.AC.......GG.....G.CACTCCACTACCCCGC....C
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------T..CA..A..TG---TCTTC.AC.......GG.....GGCACTCCACTACCCCAC....C
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------T..CA..A..TG---TCTTC.AC.......GG...T.G.CACTCCACTACCCCGC....C
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------T..CA..A..TG---TCTTC.AC.......GG.....GGCACTCCACTACCCCAC....C
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------------------------------.CA.CT...TCTG.TGGCATG..AACACAAGGGGAAGCTC.TCT.
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------------------------------.CACC.ACTTCGGCTGGTGTG..GGTTCTGGGGGAGCCCT.GCT.
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------.GA..AC.T..A---...C.TCCT..............T---------------...T.T
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------GCGGCCGCGGCCACAGACATCGTGGACAGCCAGTACGAC---------------GCCGCA
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------------CC.GGAA.C...CAGTTT...A..GGCTACGGGACTGCCTT.CG.
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------------------------------A.T.CAA.AAC.GCTTCCCT.T.TCATTCTCCGTCACCGC.AT.G
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------AGT.AT...ACGTCATCA.TAT..GAAACTCCGTCACCG.GG.TC
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------TTT..AAATCT..CT.G.---------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             TTGGGCCCACAT---------CCTGGCCTGAACCTTC.AC.AGGC.TTTC..GC.CGGAT---------------------CTCATTT.C
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------...C.A..T.T.GCGCCT.TT..T---------------------CCT.TG..C
Acanthaster-planci_oki84-25_NONE                                                        ------------------------GACAACCA.TA.AGCTA.GGTCC..G.TGCT..TT..G..C.A..ACGCGGCCCACCCCGTA.T.C
Oikopleura-dioica_GSOIDT00006159001_NONE                                                CTCGGCTTTCAA------------------------AATCATGGCTT.GAGAATC.ACA....C.AT.TCACAATTTCTACGAGCA.CA.
Oikopleura-dioica_GSOIDT00014261001_NONE                                                GTCGGC------------------------TGCAAACGC.AAG...G.GC.T.CT..GA.G.A...A..GAAGAGAGCTTGCCAAAAATC
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------.T.AA..AC.GATG..CA.CTGA...A.GGT..AACAACCATGTCCCTCTA..C
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ATGACT------------------------------CTT..A.TGCGT.AAAA.....CA---------------------CCTC.ACA.
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            GTGACG------------------------------AGT.AA..C..ACAGAAAT..GA.---------------------TTCC.TT.T
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ATAAACACAAACTTTATGTTCCCATCCGTT..ATTTCATT.TTT..T..GT.C.A..---------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------T.A.TG.TATCGTCTTCAGAG------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    GTGGCCAACCAC---------ACG------------T.CC..CAGATAGGA.ACAC.CATAGCATGTT.CAGCACCAGACCTCA.TTT.T
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ATGGCCAACCAT---------GGC------------T.CC.ACAGCTGGGA.A.------GGAATGTT.CAGCACCAGACCTCC.TG..C
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              TTATTA------------------------------CAAC.GGTTTCTTCAAGTTTAGAT------TTACACAACGTCAATCCTCAAATG
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    GGCACC------------------------------C.TC..CAGAGATCGTAC...GT.---------------------TACC.GA..
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   GGCACT------------------------------C..C.ACAGAGGTCGTAC...GTG---------------------TACC.GA..
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            GAACAC------------------------------CACC.ACACTCTCATCACC.TCA.---------------------CCGA.AT..
Ptychodera-flava_PF18712-t1_NONE                                                        GAC------------------------------------C.TCACAG.CATTCCC..TCTNNN---NNNNNNNNNNNNNNNNCGA.GT..
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------------------------------CAAAACCCGCT...T
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 TTACTC------------------------------T.CAAACATTTGGCAAAA.CTTCA---------------------TCG.AATGT
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            GACAGT------------------------------AG.CAT.AC.TGTC.AGC.CGTCGTC.---.TTAGTAACGGTAGCCCCA.GCGT
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TCAGGT------------------------------T.AC.A.TGTCTTC.TCTTCATCT---------------------CCTA.AA..
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            TCAGGA------------------------------T.AC.A.TTTCATC.TCTTCATCT---------------------CCG..TC.C
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------C.GGT..T.G.GAACTTTTAT---------------------CCTTT.CAG
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            CTGCTC------------------------------A....AG.CTCAGCGTCCACGTCG---------------------CCG------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GGCCTG------------------------------.GT.GTGGT.TGG.G.A.A.TG.T---------------------CCC------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------.GAC.AGGCAT.GGACC.ATATTT---------------------CCGA.GCGG

                                                                                        5131
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   .TGG..---AATT..TATCAGAATTCTGACTTTCAA------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ATG..GTA.G..TATTAC.GTAACCAGGGGTATCAG------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ATG..GTATG.TTA.TAC.GTAACCAGGGCTATCAG------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            T.GG.TCCTG.GGA.CA.T..AACGGCGCCACCAGTTATGAGCTTACATCTACCATAGATCATGGCTATATC------------------
Acanthaster-planci_oki20-22_NONE                                                        .GG...CTA...TA.TAC.G.GTTGGCGAAAACTTC------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ..AG...TG.ATTATGGGAATTAT------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        .GTG...TG.A.TATGGGAA.TAT------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             T..AGT---G.TGA..GCT..TCC------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              T.GAGC---AATGAA.ATT..CCA------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  T..AGT---AATGAA.ATT.ACCC------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              A...CG.TGTC.GAG.GCT..TCG------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             A.G.CC.TGTC.GAG.GTT.GTCC------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         A..ACT.A.GCAG..TCT..TGGCGCTTCGTCCTCGACA---------------------------TACGCTCCAACTTGCCTCACT---
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             CA.G.CAT.AAGA.AGAGT..TCATCCCTGGAGCACGCCGGGGAACGGGGCACTGTTGGCGGTGGAGCTGCCGTGGTCTCGGTG------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ..A.C.AA...G---------------------------------------GATGTTCTTCGA---------------------------
Acanthaster-planci_oki15-190_NONE                                                       ..A....CAG....A.GCA..ACCGACACGAGT---------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            .TG..CT...AT.AA.CG.G.TACCAAGACTCGTAC---------CACGGGGACATCACCGGGAGCTCTGTAGGTCTGGATGTCAGTGGC
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            C.TA..------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        T.AA.G.CT---------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    A.G..GACAA.GA.ACCC...AAC------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   C.G..GACAA.GA.A.CCT.AAAC------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    A.G..GACAA.GA.ACCC...AAC------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   C.G..GACAA.GA.A.CCT.AAAC------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  .T.AG.CTAGC.------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             A..AGCATTGCT------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ..A..CACT..GT.GGC.T..---------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             GCCCAAGGCCGCCTCATAGCC---------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                CG...T.TA..GAAGCGGAGTGAG------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ..TG..CTTG.T.AG.GTT.ACCG------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ATG...A.G.CA.AAGA..AT---------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             .ATG.GTCGG.AGC.GA..AACTC------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             T.G...CC.---------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        CG.G.C.TGTCGTA...GAGGGACACGCGGTACTGT------------------------------------GGTAACGGCCTG------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                A.T...AAT.A.TA.CA.AG.---------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ...A..CTTGAA.CTTCC.AGTCT------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            .G.....T.ATTAC..ATC..TAT------------------------------------------TGCATTGGAAATGACCTA------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               AAA---------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            AAA---------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    CA....CC.ATTG.GCGGCAGTGT------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             CA...GCCTGTGG...GGCAGTGT------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              CAGTCTT.T..T..GCCCCAACAG------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    .GT.TCTT.GCGGC.CCGA.A---------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   .GT.TGTT.GC.GC.CCGA.A---------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            A.GATTCCT.A.G.ACACA.G---------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ...TTGTCG.A.G.GCACT.ACAA------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                .AAA.GCTGTAT...GA...G---------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 AAAGTC.AAGCAACTTCT.AA---------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            AGTATCATG...G..GATT..AGC------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               AGAGTCA.AACGA..TC..AA---------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            CGAGTCC.AAC.A.ATCC.AG---------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        AAAA..ATTGAATA.GGC.AA---------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------ACATCGTCTT.A---------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 AGGAGTCTGA.TTC..GCC.T---------------------------------------------------------------------
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ..AA.TCCAA.ATATTCGC..---------------------------------------------------------------------

                                                                                        5221
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------GATCATTACAGGAGGCAAAATGAAAATCTCAGATGTC.C.T.C.CGAAACTCAA
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------GCGTCCGCGCACGCGCAGTTCGTAGACAGTGAGAAGTTTGCACATGCGCATTATAACGGG....ACCAC.AG.CCCA.
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------GCGTCCGCGCACGCGCAGTTCGTAGACAGTGAGAAGTTTGCACATGCGCATTACAACGGAG...ACCAC.AG.CCCA.
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------AACCAAGAGGGCGCCAAACATAACTACCCTCAGACCAACATACATGCACAGTCTAACGCAC.GCATCA.GTGT.TCAA
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------G.C.ACCAGAACAAT...
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------CGGCCTCAAAGAGAAAAAAAGAACACATACAAGACCAAAAAACAAATTAATGAGCAAGAT..CCTCCAG..C.ACGT.
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------CCAACCGCCGTGGTGAATGGAGCTCCG---------------GCCGTAGCTGCCGACA.C.....C..GC.CA.T
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------ACATCCG.C....GC..GC.TA.A
Acanthaster-planci_oki15-190_NONE                                                       ------GGGACCTACCCTGCCATTGCAAACCAGCTTTGCCCC---------------GGTAAA---GTTGGCG.T....GC..GC.TA.C
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            TATGGCAACTGTCACACATCGACTCATCATCAAAATTCACCGCATCATCAGCTTATTGGGAAAAGTGTTTCA..G....AT...C..A.A
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------------------------------------------------------CAGGG.....AC..CC.CA..
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------------------------------------------------------AATGGC....GC..CC..A..
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------AAC....GC..CA..A.C
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------AAC....GC..CA..A.C
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------AAC....GC..CA..A.T
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------AAC....GC...A..A.T
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------GATTCTG.G......------..C
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------GTGTCCA.C......G.A...G.C
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------ATG.....G..CA.CA.C
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------TCATGGACACCTGTGTCG
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------------------------CCA------------------------GGACCCGA.CTC.GCA..C.CGT.
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------CTAGCCGACGCATATGACCCG---------------ACCAAACTGACGTCAAAC.....C...C.CA.A
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------------------------------------------------TTTTCAATCG.G.AT..G..GC.TA..
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ---------------------------------------------------------------AATATGAAT---GTA.ATAAG------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------GAACTGGATGTGGGCAGTGAAACGAGCACGTTGGAG------------------------CAG.CT..G.AG.AACA.
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------GTTGGCTCCAGCACACCCACA------------------------------------------ACA..A
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------GGT.AC.TGGGGCGAA..
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------.TC.ACCA.GA.TCT.TT
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------AACCCTGCAACTTCTAGTCCA------------------------------------CT..A.GTC.CT..A
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------CACGACTTAGATTCTTCAACA------------------------------------CTA...AA.ACC...
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------AAT---------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------------------------------------------------AATTTGAGA---CTACGTGA.TC.ATT
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------------------CAAGATAAAACCAGCTTCGATTTGCGG..CGT..G..G.TCTATC
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------GGACCTCAGACCGGCATCCAGTCTCCCCCCAGCAGCTTGCAGCCTGCAGAGTTCCTC------.ATT.C.AC.GCGT.
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------GGGCCTCAGACTGGCCTGCAGTCC---CCTGGCACCCTTCAGCCCCCTGAGTTCCTC------.ACT.T.A..GCGT.
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------ACCAGCGATTGCGCACTTCGTCAACCATCCGGGCATTTACCGAGTAGCCATAACTAT---GG.ATCCGTA..ACCC..
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------GCTTACGAACCTCTGGACTACGCCACGACGTGTAAGATGGCGGGGTTCTCG---------CGGAT.CAGATGAGCGT.
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------GCGTACGAACCGCTGGACTACGCCACCACGTGTAAGATGGCCGGGTTCTCG---------CGGAT.CAGATGAGTGTA
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------CAGTCGCATGTACAACAACTA---CAACAAACGAATATCCCGACATGCCACGCGTTA---G.TG.C..GT.CTC.ATA
Ptychodera-flava_PF18712-t1_NONE                                                        ------------CAGTCGCACGTGCAATCCTTGTCACAGCAGACGACTATCCCGACATGCAATGCCTTG---..GGCAT.GA.GTCCATT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------------------------------------------------------------CTA.G.G.CAAA.T.
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------GATTCTGAAGAAGCTGAAAAG---------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------GATGGCGACTCGGAGATGAAGGAAGAGCCGGTGTCTCCGAAATCGATG------------AGCC.C.G.AGC.C.GTC
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------TCGTCTGACGGAGCAAAAGTGGAGCCGTGTAATAGATCGCCCAGCGGCTACCACAGTCCG..CATTT.CT.A.C.GTC
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------TCCTCGGACGGGATGAAACCAGAGCCATGCCGAAGATCATCGAACACCTACCCGAGTCCTA.CATTGGCA.C.CTGT.
Ptychodera-flava_PF10086-t1_NONE                                                        ------------ATTATAAGTTGCGCAACGCTATCGCCCCAGTCTCGACGAGTCTCGTGCCAAGAATGC---GA.ATT.GTG...CC---
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------TCGTCACTTCCAGCCAGTAAAGACGTGCCAACATCGCCGGCAAGGTCG---------------ATC.GCG.A.CCA.T
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ------------CGTCCCCGACCTGCCTCCCACTCGCCGCCCACTCGACCGATTTCG------------------AT.T....CACAA..
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------TACGCCCTGTCGATGTCAAAATCACCAAGCGACTCT------TCATCGAGGGATATG---AACATTT.TT.G.CA...

                                                                                        5311
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------AACCGATTATACACT---------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   GTA---AACACGGTATAC------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 TAC---AACGGGGGGTACATG...A.AAG..CCGCC------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   TAT---AATGGGGGGTACATG...A.AAG..CAGCC------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            CCGTACGGTAACATGTACTTC..T.AGAGTT.CCCG------------------------TCCTTTCCCTCGCAACCTTCCACCATGAAC
Acanthaster-planci_oki20-22_NONE                                                        ---------------------..CATGAA.TATTCGTACATGGGACAA------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ---------------------..T.AAATATCAAAT------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ---------------------..G..AATATCTGGA------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ---------------------..TG..GGGGCCCCT------------------------TCTCCTTTTGATAAGGAAGCTGAAGGA---
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ---------------------T.CATGAAATGTGAG------------------------GACATTAATGCTGAGGACTATAGCAAAGAC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ---------------------T.CATAAAGTGTGAG------------------------GACATTAATGCTGAAGAGTATAGTAAAGAC
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ---------------------..C.TCAAG.GCGAG------------------------GTTCTCACCCAGCGGGACTGCGATAAGACC
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ---------------------..G.TCAAG.GCGAG------------------------GTGCTGGCCCAGCGGGACTGCGAGAAGAAC
Acanthaster-planci_oki58-6_NONE                                                         AATCCAGGC------------..CAGGAATC.CGAACTTACCAAC---------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ---------------------..G..ACAG.GCACGCTGCAG------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ---------------------..C..GC.A..A---------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ---------------------.....C..GCCAGGAATGTAA------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ---------------------.....A..TG.T---------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ---------------------......CTGG.ATAA------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ---------------------........AG.T---------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ---------------------ATG..G......---------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ---------------------ATG..G......---------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ---------------------........AC..---------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ---------------------.....A..GC.C---------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ---------------------T...AC...T.T---------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ---------------------T.G.A.C..T.CGCGGGCTGGGGT---------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ---------------------............---------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ---------------------CCACCTTCCATG---------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ---------------------GGC..AAGATGC---------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ---------------------..G.....TC..---------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ---------------------........TT..---------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------....TGGAA---------------------CAA------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------...AGGC.T---------------------TCA------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        AACCCGCAGTTCGCCTACGAC..CT.CA.....ATGGGTGGGATCGAT------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------GGTTTTGCG..GGAGC.A..TTTA------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------CTCGCTTCCTTTCTG..C.GCCTTTC.TGA------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ---------------------..TGTA.G.GGAAGCTTAGCTGCGCCA------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ---------------------..C..CA..------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ---------------------..CA.AAA.------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------..TG.AGAA..TTCA------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---------------------..CG.CAGTGCTTCT---------------------------------------------ACGTATACT
Acanthaster-planci_oki169-35_NONE                                                       CAG---GAGGACGAGTGGTTT..GGTG...------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ---------------------..T.GAA..C.CTCG------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ---------------------...AGGA.TC.ATCC------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ---------------------..TA..CAA------------------------------CATCCCTCTCTGCCATCTTGCACCTATATG
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ---------------------G.G..CG.G------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ---------------------G.T..CG.G------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------..CAGCCAGT.CTTG------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---------------------..TGGCCAAT.CTTG------------------------------------------------------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ---------------------..C------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 ---------------------..G..A...------------------------------CTGATGAAGCAACCACGTGGCGGTGGTGCT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ---------------------..T..G..A.ATGGCGGAATTAGCCGACCGTCGCCGATCAGACCACGAAGTCCATTAGGACACCATTTA

                                                                                        5401
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 AGCGCAGAAACAGCATCTGGACATTAC---------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   AGCGCCGAAACAGCAACTGGGCATTAC---------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            GGGTACAACATCCCTCAGCAGCCGTAC------AATTCCATCAACAATATGCTCTGT---------------CATGGGCAATCATATCCT
Acanthaster-planci_oki20-22_NONE                                                        ------------CCTCGGGCAGGACTAAACCTTCCAACTACCACTCCTTACTACTTC------------CAGCAAAACAACTAG------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------TATAACGGTGGATACTGA------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------TTTGGTGGTACTTAC---------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------CAGTTTTAT---------------------------------------------------AACTATTTTCCC
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ACTTCAAAAGGCATG---GGCTACTAT---------------------------------------------------GCGTTCTATACC
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ACCTCAAAAGGCATGGGAGGGTATTAT---------------------------------------------------GCTTTTTACACA
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              TGCGCCAAGGACATC---GGCTACTAC---------------------------------------------------GGCTTCTATTCG
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             TGCGCCAAGGACATTAGCGGCTACTAT---------------------------------------------------GGCTTCTACTCG
Acanthaster-planci_oki58-6_NONE                                                         ------------CCTTAA------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             GGCCCAGGA---GCGGGTGGGCACCATTCTCCTTCCTCACTGGATGGT------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------TACAGGCTCGCCAGATTCAAGCTACTGGTCTGA---------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ---------------------------------CCATCTACAAGGAGCAAG---------------------------GGCTTCAGCATA
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ---------------------------------ACCTCAACGAAAAGAAAT---------------------------AGCTTCAGCATT
Acanthaster-planci_oki84-25_NONE                                                        ------------CCGCGGAGGAACTACACC------------------------------------------------CAACACATGGTC
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------AATCAGAATTTG
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------AGAAGGCATGTG
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------CCACATACCATATAC---------------TCAATGTTG---------------------------CACGCAAACACT
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------GCACAGTCGATCTAT---------------TCCATGCTG---------------------------CATGCCAATACC
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     TCTCCGGAA---CCCACCGGACTTCATCATCCGCCGGCAGCTTACCGCTAC---------------------------CATCCTTATCTC
Acanthaster-planci_oki169-35_NONE                                                       ------------------------CATGCATTCAGGGAGTCTCATCGTTAC---------------------------CACAAGCATCTG
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------CCCCACCAGTACCACTCGGTGCACGGTGTGGGCATGGTGCCA------------------------GAGTGGAGCGAG
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------CCTCATCAGTACCACTCTGTGCACGGAGTTGGCATGGTGCCA------------------------GAGTGGAGCGAC
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              CAGCCGGCACAACCTTATCCAACTCACCTTGCTCCAAATGTTCACATGATG---------------------------AACATGAACTTT
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------CCGCACCTCAGCCACTTC---CCGACGTCTTCTGCCACC---------------------------ACCATGCCGGTC
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------CCGCATCTCAGCCACTTC---CCCACGTCCTCTGCCACC---------------------------TCCATGCCCGTC
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------CACACGCACACTAACACAGCGACGATGGGTATG------------------------------AATGTTCATATG
Ptychodera-flava_PF18712-t1_NONE                                                        ------------CCCGCAACATACACAAACACCCCGACCATGGCCGTCATCAAACTGGCAAAGGCCTTTCGGAATGATAATGTACTCATT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------AATTTCTAA---
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ---------------------------------CCTGAAGTGAAGAAAGAG---------------------------CAAAAGTCAGTG
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ---------------------------------CACGAGATTCGTAATATG---------------------------GAACGTTTGGTG
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ---------------------------------CAGGAGTTAAGAAATATG---------------------------GAGAACTTGGTT
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ---------------------------------CAGGAATTAAGAAACATG---------------------------GAAAATTTAGTT
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------------GTAAAACGGATT---------------------------GATCTGATGGTT
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ---------------------------------AATGAACTCCAAAGCATA---------------------------CAAAAGATGGTG
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 GGCGCCGGTGTGGCCCAATCGCAGCACTCGCCTTCGGAACTTAAGAGCATG---------------------------GAGAAGATGGTC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    TCCCCCGGT---TCATCGGGAACGAACCCGACTAGCGAACTGAAAAGCATG---------------------------GAATTAATGTTA

                                                                                        5491
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            AATGCA------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             AAC---------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              AGTTCT------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ACTCCC------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              CACAGC------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             CACAGC------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             TCGGCCATTTTGGGGGGAGGAAGT------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             TCAGCCATTTTGGCCTAT------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        TGA---------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                GACCAGAATCTTATCACTTTTCTCGAATAA------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            GTGTGA------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               TCT------CAGAGAAAACATTCGTCAATT------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            AAT------TGGAATAACCCTTTTAACGTT------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ACGCCG------------------------------------------------------GATAAAATCAGCGCCGCACAG---------
Acanthaster-planci_oki169-35_NONE                                                       GCTCAG------------------------------------------------------GGCCCTTAT---GCTTCCATC---------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    AACAGC------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             AATAGC------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ACC---------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    AAC------TTCCACGGGATGTTCAACACC------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   AAC------TTCCACGGCATGTTCAACACG------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            AGCAGT------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ACTTCT------------GGACTATACATCCGGCTACGA---------------------------GTATCATTGGCCTCT---------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ACACCACCCAAAAAGGGAGGTTTTGATGTT------------------------------------CTCGATTTGTTGTCA---------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            TCC---------------GGGTTGGAGCGGAGG---------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               TCT---------------GGTTTAGAT---------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            TCT---------------GGTTTGGAC---------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ACT---------------ACCGCTGAC---------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            AGC---------------GGACTCGAT---------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 AAC---------------GGACTGGAGGTTCAACACAATGGCAGTGCGGCGGCAGCAGCGGCGGCTCTTCAGCTGGCCGAGGAAGCTGCC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    AAT---------------GGTTTGGAC---------------------------------------------------------------

                                                                                        5581
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------TCCACGAAACCATGTGACCAA---------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------TCTAAAACAAACAGCGAATAT---------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ---------------------------------------------------ATAAAATCAGAA---------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------AAGTCTGCGGAATCATCGGTCACGGACACCTGTCGA
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------AAAACGACTAGAAGTGCGTCTACATTATTTGCTCCG
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------GGACCAATGGCC------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------CACCCCATGCCTGCAGCCTACCCTGGA---------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------CACCCCATGCCGGCGGCTTACCCTGGA---------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ------------------------------------------------------AGTTCACAACCTGATTCCCGGTCGGTG---------
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------AAGCCT------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------AACAAAATTTCTAGCGAATAG---------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------AAAGCCCGGCGACAC---------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------AAAACAAGACGTCATTCC------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------CGTTCCATGTCAGCCATCGACCGTCCG---------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------AAAACACAGAAA------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CAGCATCATCATCACACCCAGGCGCACCACCAGCAGCAGCAGCATCAGTCGCACCACCAGCAACAGCACCACCAGCAACCGGCACAACCA
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------AGAAAGAAAGGACCGCATCGAGATCCAAATTCT---

                                                                                        5671
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ---CCG------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---CCCTCT---------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------CATGCGGGCAAGTTCGCAGCA---------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------CACGCGGGCAAGTTTGCGGCT---------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        ---CCAATGAAACGGTACACCGTCTGGTCTCGCTGTGGTACATTCCAAAGC---ACAGGACGCACTGGTATTGGCAGTACCCGTGAACAT
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 CATCCGCACCACCAGACCCATCTACACTCGCACCATGGGGCGACAACGGGCGGTACGGATCAGTGACAATTACTGGACGGCCGCTCCGAT
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------------------------------

                                                                                        5761
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ---------------------------------CTTGTCCGTTGA---------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ------------------------------------------------------------------------------------------
Ptychodera-flava_PF18712-t1_NONE                                                        GCCTATCATATCAAACCAGTCATCGGGCGCTTTATTGAGCGACACCTAGACGATTTAAACTGTCGAAACTGT---------TTCGTTCGA
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------GAAGAACTTAGATTAAACAAAGTA------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------GAGGAGTTAAGAGTAAACAAAGCA------------------
Ptychodera-flava_PF10086-t1_NONE                                                        ---------------------------------ATATGGCAGAAATTGAGTCTGATTAATTGTAACAAAAACCAGAAGCAGCAGAGTGCA
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 TGTGAGGATGCCGGTCTCGAATTGGAACTAGAGTTGGAGGAGGATGTCGAGGATCTGGATCAGGATCCGGATGAGCAGGACGAGGATCGC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------TTGCTAATGGAGAAA---------------------------------------------

                                                                                        5851
Used4treeSearch                                                                         000000000000000000000000000000000000000000000000000000000000000000
Crassostrea-gigas_EKC28235_T-box-brain-protein-1                                        ------------------------------------------------------------------
Pinctada-fucata_pfu5110-102705t1_NONE                                                   ------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019632778.1_109476306-brachyury-protein-like                 ------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035658836.1_118404018-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU025584-tr_SP-TBR-Uncharacte                            ------------------------------------------------------------------
Acanthaster-planci_oki20-22_NONE                                                        ------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30002752_NONE                                            ------------------------------------------------------------------
Ptychodera-flava_PF12118-t1_NONE                                                        ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000177694.2_TBX21-T-box-transcripti                             ------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000042658.4_EOMES-eomesodermin                              ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000449599.4_EOMES-eomesodermin                                  ------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000067150.2_TBR1-T-box-brain-1                              ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000389554.8_TBR1-T-box-brain-transc                             ------------------------------------------------------------------
Acanthaster-planci_oki58-6_NONE                                                         ------------------------------------------------------------------
Drosophila-melanogaster_FBtr0332070_byn-brachyenteron-DBNLI                             ------------------------------------------------------------------
Crassostrea-gigas_EKC28765_Brachyury-protein                                            ------------------------------------------------------------------
Acanthaster-planci_oki15-190_NONE                                                       ------------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU013015-tr_SP-BRA-Uncharacte                            ------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30011577_NONE                                            ------------------------------------------------------------------
Ptychodera-flava_PF18670-t1_NONE                                                        ------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623304.1_109469262-brachyury-protein-homolog-2-isoform    ------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687366.1_118423359-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019623300.1_109469259-brachyury-protein-homolog-1-isoform    ------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035687472.1_118423429-T-box-transcription-factor-T-homolo   ------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000024597.4_TBX19-T-box-19                                  ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000367821.8_TBX19-T-box-transcripti                             ------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000018726.5_TBXT-T-brachyury-tra                            ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000366876.7_TBXT-T-box-transcriptio                             ------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00000279001_NONE                                                ------------------------------------------------------------------
Botryllus-schlosseri_botctg002459g63408_NONE                                            ------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000003855.1_NONE                                               ------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000001477.3_brachyury-transcript                            ------------------------------------------------------------------
Caenorhabditis-elegans_H14A12.4_mls-1-T-box-transcription-fa                            ------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076547_Doc2-Dorsocross2-DBNLIN                             ------------------------------------------------------------------
Drosophila-melanogaster_FBtr0076522_Doc1-Dorsocross1-DBNLIN                             ------------------------------------------------------------------
Acanthaster-planci_oki84-25_NONE                                                        ------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00006159001_NONE                                                ------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00014261001_NONE                                                ------------------------------------------------------------------
Botryllus-schlosseri_botctg005874g48703_NONE                                            ------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000034896.1_NONE                                            ------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000020041.1_NONE                                               ------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000037322.1_tbx6a-T-box-transcri                            ------------------------------------------------------------------
Caenorhabditis-elegans_T27A1.6_mab-9-T-box-protein-12                                   ------------------------------------------------------------------
Pinctada-fucata_pfu26-120078t1_NONE                                                     ------------------------------------------------------------------
Acanthaster-planci_oki169-35_NONE                                                       ------------------------------------------------------------------
Gallus-gallus-E102_ENSGALT00000013434.6_TBX5-T-box-5                                    ------------------------------------------------------------------
Homo-sapiens-E102_ENST00000405440.7_TBX5-T-box-transcriptio                             ------------------------------------------------------------------
Crassostrea-gigas_EKC20476_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------
Branchiostoma-belcheri-1_XP019614038.1_109461997-T-box-containing-protein-TBX6L-like    ------------------------------------------------------------------
Branchiostoma-floridae-rs_XP035691536.1_118426331-T-box-containing-protein-TBX6L-like   ------------------------------------------------------------------
Saccoglossus-kowalevskii_Sakowv30012255_NONE                                            ---------------------------CATTTTCCAACTCACACTATGAAATTTTCCGCCTGA---
Ptychodera-flava_PF18712-t1_NONE                                                        TCATATTTCATCGACAGTTTCACTCGATATTTCCGAGTGTCAACGCTGTGGTTAAATTCTAAG---
Oikopleura-dioica_GSOIDT00004289001_NONE                                                ------------------------------------------------------------------
Caenorhabditis-elegans_F21H11.3.1_tbx-2-T-box-protein-2                                 ------------------------------------------------------------------
Oikopleura-dioica_GSOIDT00007455001_NONE                                                ------------------------------------------------------------------
Botryllus-schlosseri_botctg007226g53212_NONE                                            ------------------------------------------------------------------
Ciona-savignyi_ENSCSAVT00000016577.1_NONE                                               ------------------------------------------------------------------
Ciona-intestinalis_ENSCINT00000017704.3_NONE                                            ------------------------------------------------------------------
Ptychodera-flava_PF10086-t1_NONE                                                        AAT---------------------------------------------------------------
Strongylocentrotus-purpuratus_SPU023386-tr_SP-TBX2-3-Unchara                            ------------------------------------------------------------------
Drosophila-melanogaster_FBtr0331162_bi-bifid-DBNLINE-60                                 AGCTCGGTCATCGAT------------------------------CTTGATCTGGACGTCGACGTC
Crassostrea-gigas_EKC26469_T-box-transcription-factor-TBX2                              ------------------------------------------------------------------
Pinctada-fucata_pfu930-101250t1_NONE                                                    ------------------------------------------------------------------